PROJECT INFORMATION
GOLD Project ID
Gp0440334  
Project Name
Gypsum microbial communities from Salar Grande, Tarapac Region, Chile - G-Km37-3P3  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Gypsum microbial communities from Salar Grande, Tarapac Region, Chile - G-Km37-3P3
NCBI BioProject Accession PRJNA677473
NCBI Locus Tag
IWY90  
NCBI BioSample Accession SAMN16773842
PI Jocelyne DiRuggiero
Added By JGI automated process on 2019-08-09
Last Modified By JGI automated process on 2022-07-23
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Gypsum microbial communities from Salar Grande, Tarapac Region, Chile  
Is JGI Project
Yes  
Project Information Visibility Public
PROJECT TYPE
Specimen Biome
Nucleic Acid DNA
Sequencing Strategy
Metagenome  
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
Restricted  
JGI Award DOI 10.46936/10.25585/60001238
JGI Portal Download Raw Sequence Data
Genome Publications
  
Other Publications
  
Ignored Publications
  
Unassigned Publications
  
SRA Experiment
 
SRA Experiment Id SRX9601808  (Link to NCBI )
Experiment Title G-Km37-3P3_MG
Exp Library Strategy WGS
Library Source METAGENOMIC
Library Selection RANDOM
Library Name GSBWB
Library Layout PAIRED
PROJECT COMPOSITION
Study Biogeographic diversity and light adaptation of endolithic cyanobacteria from deserts around the world
Biosample Gypsum microbial communities from Salar Grande, Tarapac Region, Chile - G-Km37-3P3
Analysis Projects Gypsum microbial communities from Salar Grande, Tarapac Region, Chile - G-Km37-3P3
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal Level 1: Standard Draft
Contamination Screening Input
  
DNA Amplification Method
  
Sorting Technology
  
Single Cell Lysis Protocol
  
Single Cell Lysis Approach
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) Illumina NovaSeq S4
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Gypsum microbial communities from Salar Grande, Tarapac Region, Chile - G-Km37-3P3
Other Names (alias, synonyms, short names)
  
Sample Description
Gypsum microbial communities from Salar Grande, Tarapac Region, Chile  
SAMPLE TAXONOMY
NCBI Taxonomy ID 1311626
GOLD CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Rock-dwelling (subaerial biofilms)  
Ecosystem Subtype
  
Specific Ecosystem
  

 

 

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