PROJECT INFORMATION
GOLD Project ID
Gp0437724  
Project Name
Escherichia coli sv. O157:H7 C1-010  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Draft Genome Sequence of Shiga Toxin-Producing Escherichia coli O157:H7 Strain C1-010, Isolated from Feedlot Cattle
NCBI BioProject ID 503631
NCBI BioProject Accession PRJNA503631
NCBI Locus Tag
EQ902  
NCBI BioSample Accession SAMN10368181
PI Mo Jia
Added By Mo Jia on 2019-07-17
Last Modified By Galina Ovchinnikova on 2019-07-25
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center Pacific Biosciences (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
Draft Genome Sequence of Shiga Toxin-Producing Escherichia coli O157:H7 Strain C1-010, Isolated from Feedlot Cattle  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Escherichia coli sv. O157:H7 C1-010
Organism Escherichia coli sv. O157:H7 C1-010
Analysis Projects Escherichia coli sv. O157:H7 C1-010
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 4: Annotation-Directed
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) PacBio Sequel
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0516202
Organism Name
Escherichia coli sv. O157:H7 C1-010  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA  
Genus
Escherichia  
Genus Synonyms
  
Species
Escherichia coli  
Subspecies
  
Species Synonyms
  
Strain
C1-010  
Strain Synonyms
  
Serovar/Cultivar
O157:H7  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
2  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 83334
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Enterobacterales  
NCBI Family
Enterobacteriaceae  
NCBI Genus
Escherichia  
NCBI Species
Escherichia coli  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Agricultural field  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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