PROJECT INFORMATION
GOLD Project ID
Gp0436159  
Project Name
Fusobacterium necrophorum KG35  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Fusobacterium necrophorum Isolated From the Uterus of Dairy Cows
NCBI BioProject ID 513072
NCBI BioProject Accession PRJNA513072
NCBI Locus Tag
  
NCBI BioSample Accession SAMN10695581
PI Amye Francis
Added By Amye Francis on 2019-06-17
Last Modified By
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center University of Florida (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
Sequence the genome of Fusobacterium strains isolated from dairy cows with metritis  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX5402668
Experiment Title WGS of Fusobacterium necrophorum KG35
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection unspecified
Library Name KG35
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
PROJECT COMPOSITION
Study Fusobacterium necrophorum Isolated From the Uterus of Dairy Cows
Organism Fusobacterium necrophorum KG35
Analysis Projects Fusobacterium necrophorum KG35
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal Level 1: Standard Draft
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina MiSeq
Library Method (MIGS-28)
  
Number Of Reads
1093012  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0515352
Organism Name
Fusobacterium necrophorum KG35  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FUSOBACTERIA  
Genus
Fusobacterium  
Genus Synonyms
  
Species
Fusobacterium necrophorum  
Subspecies
  
Species Synonyms
  
Strain
KG35  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 859
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Fusobacteria  
NCBI Class
Fusobacteriia  
NCBI Order
Fusobacteriales  
NCBI Family
Fusobacteriaceae  
NCBI Genus
Fusobacterium  
NCBI Species
Fusobacterium necrophorum  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Animal  
Ecosystem Type
Reproductive system  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases Endometritis
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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