PROJECT INFORMATION
GOLD Project ID
Gp0406208  
Project Name
Enriched cells from non-planted soil in EcoFAB chamber, Walnut Creek, California, United States - BONCAT cells Soil RepC EcoBCT.Soil.5000.2.K4  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Enriched cells from non-planted soil in EcoFAB chamber, Walnut Creek, California, United States - BONCAT cells Soil RepC EcoBCT.Soil.5000.2.K4
NCBI BioProject ID 654857
NCBI BioProject Accession PRJNA654857
NCBI Locus Tag
H4489  
NCBI BioSample Accession SAMN15738921
PI Trent Northen
Added By JGI automated process on 2019-05-14
Last Modified By JGI automated process on 2020-08-05
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Enriched cells from non-planted soil in EcoFAB chamber, Walnut Creek, California, United States; soil with full nutrient supply  
Is JGI Project
Yes  
Project Information Visibility Public
PROJECT TYPE
Specimen Biome
Nucleic Acid DNA
Sequencing Strategy
Metagenome - Cell Enrichment  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Enriched cells from switchgrass and soil in EcoFAB chamber, Walnut Creek, California, United States
Biosample Enriched cells from non-planted soil in EcoFAB chamber, Walnut Creek, California, United States - BONCAT cells Soil RepC EcoBCT.Soil.5000.2.K4
Analysis Projects Enriched cells from non-planted soil in EcoFAB chamber, Walnut Creek, California, United States - BONCAT cells Soil RepC EcoBCT.Soil.5000.2.K4
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Sorting Technology
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) Illumina NextSeq-HO
Library Method (MIGS-28)
Illumina Nextera with Size Selection, Plates  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Enriched cells from non-planted soil in EcoFAB chamber, Walnut Creek, California, United States - BONCAT cells Soil RepC EcoBCT.Soil.5000.2.K4
Other Names (alias, synonyms, short names)
  
Sample Description
Enriched cells from non-planted soil in EcoFAB chamber, Walnut Creek, California, United States; soil with full nutrient supply  
SAMPLE TAXONOMY
NCBI Taxonomy ID 410658
GOLD CLASSIFICATION
Ecosystem
Engineered  
Ecosystem Category
Lab enrichment  
Ecosystem Type
Defined media  
Ecosystem Subtype
  
Specific Ecosystem
  

 

 

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