PROJECT INFORMATION
GOLD Project ID
Gp0402317  
Project Name
Enrichment culture of microbial communities from JGI pond, Walnut Creek, California, United States - JGI Pond Phototropic Consortia - 29  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name
  
NCBI BioProject ID
NCBI BioProject Accession
NCBI Locus Tag
  
NCBI BioSample Accession
PI Tanja Woyke
Added By JGI automated process on 2019-04-03
Last Modified By JGI automated process on 2019-08-27
Project Comments
  
Project Status
targeted  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Enrichment culture of microbial communities from JGI pond, Walnut Creek, California, United States; cultured 33 days in K3 anoxic media supplemented with H2S and 2-oxoglutarate 0.5mM  
Is JGI Project
Yes  
Project Information Visibility Public
PROJECT TYPE
Specimen Biome
Nucleic Acid DNA
Sequencing Strategy
Metagenome  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Studying microbial cell-cell associations in a wide range of aquatic ecosystems
Biosample Enrichment culture of microbial communities from JGI pond, Walnut Creek, California, United States - JGI Pond Phototropic Consortia - 29
Analysis Projects Enrichment culture of microbial communities from JGI pond, Walnut Creek, California, United States - JGI Pond Phototropic Consortia - 29
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Awaiting Sample
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal Level 1: Standard Draft
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina NovaSeq
Illumina NextSeq-HO
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Enrichment culture of microbial communities from JGI pond, Walnut Creek, California, United States - JGI Pond Phototropic Consortia - 29
Other Names (alias, synonyms, short names)
  
Sample Description
Enrichment culture of microbial communities from JGI pond, Walnut Creek, California, United States; cultured 33 days in K3 anoxic media supplemented with H2S and 2-oxoglutarate 0.5mM  
SAMPLE TAXONOMY
NCBI Taxonomy ID 1851193
GOLD CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  

 

 

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