PROJECT INFORMATION
GOLD Project ID
Gp0396411  
Project Name
Contaminated culture fungal communities from Oregon State University, United States - Benjaminiella poitrasii RSA 903  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Contaminated culture fungal communities from Oregon State University, United States - Benjaminiella poitrasii RSA 903
NCBI BioProject ID 522477
NCBI BioProject Accession PRJNA522477
NCBI Locus Tag
EXX96  
NCBI BioSample Accession SAMN10941219
PI Joseph Spatafora
Added By JGI automated process on 2019-02-07
Last Modified By Supratim Mukherjee on 2019-03-26
Project Comments
  
Project Status
incomplete  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Contaminated culture fungal communities from Oregon State University, United States  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Biome
Nucleic Acid DNA
Sequencing Strategy
Metagenome  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Study Expanding fungal reference genomes with early diverging lineages (EDL) of fungi
Biosample Contaminated culture fungal communities from Oregon State University, United States - Benjaminiella poitrasii RSA 903
Analysis Projects
  
Number of Analysis Projects 0
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal Level 1: Standard Draft
Sequencing Comments
  
Sequencing Technology (MIGS-29) PacBio Sequel
PacBio RS II
Library Method (MIGS-28)
PacBio >10kb w/ AMPure Bead Size Selection, Tubes  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
45  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Contaminated culture fungal communities from Oregon State University, United States - Benjaminiella poitrasii RSA 903
Other Names (alias, synonyms, short names)
  
Sample Description
Contaminated culture fungal communities from Oregon State University, United States  
SAMPLE TAXONOMY
NCBI Taxonomy ID 1670606
GOLD CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Fungi  
Ecosystem Type
Mycelium  
Ecosystem Subtype
  
Specific Ecosystem
  

 

 

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