PROJECT INFORMATION
GOLD Project ID
Gp0396282  
Project Name
Marine pelagic microbial communities from Tasman Sea - 102.100.100/35827  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Metagenome from Australian marine benthic and pelagic environments
NCBI BioProject ID 385736
NCBI BioProject Accession PRJNA385736
NCBI Locus Tag
  
NCBI BioSample Accession SAMN07483085
PI Andrew Bissett
Added By JGI automated process on 2019-02-04
Last Modified By
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Environmental
Sequencing Center Commonwealth Scientific and Industrial Research Organisation (CSIRO) (Australia)
Collaborating Institute
  
Funding Agency
  
Project Description
Marine pelagic microbial communities from Tasman Sea  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Biome
Nucleic Acid DNA
Sequencing Strategy
Metagenome  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX3076250
Experiment Title Marine_amplicon
Exp Library Strategy AMPLICON
Library Source METAGENOMIC
Library Selection PCR
Library Name 35827_18S_B9JCN
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
 
SRA Experiment Id SRX3076242
Experiment Title Marine_metagenomics
Exp Library Strategy WGS
Library Source METAGENOMIC
Library Selection PCR
Library Name 102.100.100/35827
Library Layout PAIRED
Library Instrument ILLUMINA_HI_SEQ_2500
 
SRA Experiment Id SRX3496332
Experiment Title Marine_amplicon
Exp Library Strategy AMPLICON
Library Source METAGENOMIC
Library Selection PCR
Library Name 35827_A16S_BBM5C
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
 
SRA Experiment Id SRX3496331
Experiment Title Marine_amplicon
Exp Library Strategy AMPLICON
Library Source METAGENOMIC
Library Selection PCR
Library Name 35827_18S_B9JCN
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
 
SRA Experiment Id SRX3075895
Experiment Title Marine_amplicon
Exp Library Strategy AMPLICON
Library Source METAGENOMIC
Library Selection PCR
Library Name 35827_16S_B9YMG
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
 
SRA Experiment Id SRX3496326
Experiment Title Marine_amplicon
Exp Library Strategy AMPLICON
Library Source METAGENOMIC
Library Selection PCR
Library Name 35827_16S_B9YMG
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
 
SRA Experiment Id SRX3496329
Experiment Title Marine_metagenomics
Exp Library Strategy WGS
Library Source METAGENOMIC
Library Selection PCR
Library Name 102.100.100/35827
Library Layout PAIRED
Library Instrument ILLUMINA_HI_SEQ_2500
 
SRA Experiment Id SRX3076249
Experiment Title Marine_amplicon
Exp Library Strategy AMPLICON
Library Source METAGENOMIC
Library Selection PCR
Library Name 35827_A16S_BBM5C
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
PROJECT COMPOSITION
Study Marine microbial communities from benthic and pelagic environments in Australia
Biosample Marine pelagic microbial communities from Tasman Sea - 102.100.100/35827
Analysis Projects Marine pelagic microbial communities from Tasman Sea - 102.100.100/35827
Combined Assembly of marine microbial communities from pelagic environments in Australia
Number of Analysis Projects 2
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) ILLUMINA_HI_SEQ_2500
ILLUMINA_HI_SEQ_2500
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Marine pelagic microbial communities from Tasman Sea - 102.100.100/35827
Other Names (alias, synonyms, short names)
  
Sample Description
Marine pelagic microbial communities from Tasman Sea  
SAMPLE TAXONOMY
NCBI Taxonomy ID 408172
GOLD CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Pelagic  
Specific Ecosystem
  

 

 

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