PROJECT INFORMATION
GOLD Project ID
Gp0396260  
Project Name
Marine pelagic microbial communities from Tasman Sea - 102.100.100/35794  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Metagenome from Australian marine benthic and pelagic environments
NCBI BioProject ID 385736
NCBI BioProject Accession PRJNA385736
NCBI Locus Tag
  
NCBI BioSample Accession SAMN07483052
PI Andrew Bissett
Added By JGI automated process on 2019-02-04
Last Modified By
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Environmental
Sequencing Center Commonwealth Scientific and Industrial Research Organisation (CSIRO) (Australia)
Collaborating Institute
  
Funding Agency
  
Project Description
Marine pelagic microbial communities from Tasman Sea  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Biome
Nucleic Acid DNA
Sequencing Strategy
Metagenome  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX3076197  (Link to NCBI )
Experiment Title Marine_amplicon
Exp Library Strategy AMPLICON
Library Source METAGENOMIC
Library Selection PCR
Library Name 35794_16S_B9YMG
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
 
SRA Experiment Id SRX3496672  (Link to NCBI )
Experiment Title Marine_metagenomics
Exp Library Strategy WGS
Library Source METAGENOMIC
Library Selection PCR
Library Name 102.100.100/35794
Library Layout PAIRED
Library Instrument ILLUMINA_HI_SEQ_2500
 
SRA Experiment Id SRX3496666  (Link to NCBI )
Experiment Title Marine_amplicon
Exp Library Strategy AMPLICON
Library Source METAGENOMIC
Library Selection PCR
Library Name 35794_18S_B9JCN
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
 
SRA Experiment Id SRX3496667  (Link to NCBI )
Experiment Title Marine_amplicon
Exp Library Strategy AMPLICON
Library Source METAGENOMIC
Library Selection PCR
Library Name 35794_A16S_BBM5C
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
 
SRA Experiment Id SRX3496669  (Link to NCBI )
Experiment Title Marine_amplicon
Exp Library Strategy AMPLICON
Library Source METAGENOMIC
Library Selection PCR
Library Name 35794_16S_B9YMG
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
 
SRA Experiment Id SRX3076271  (Link to NCBI )
Experiment Title Marine_metagenomics
Exp Library Strategy WGS
Library Source METAGENOMIC
Library Selection PCR
Library Name 102.100.100/35794
Library Layout PAIRED
Library Instrument ILLUMINA_HI_SEQ_2500
 
SRA Experiment Id SRX3075814  (Link to NCBI )
Experiment Title Marine_amplicon
Exp Library Strategy AMPLICON
Library Source METAGENOMIC
Library Selection PCR
Library Name 35794_A16S_BBM5C
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
 
SRA Experiment Id SRX3075813  (Link to NCBI )
Experiment Title Marine_amplicon
Exp Library Strategy AMPLICON
Library Source METAGENOMIC
Library Selection PCR
Library Name 35794_18S_B9JCN
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
PROJECT COMPOSITION
Study Marine microbial communities from benthic and pelagic environments in Australia
Biosample Marine pelagic microbial communities from Tasman Sea - 102.100.100/35794
Analysis Projects Combined Assembly of marine microbial communities from pelagic environments in Australia
Marine pelagic microbial communities from Tasman Sea - 102.100.100/35794
Number of Analysis Projects (AP)
2  
Number of Derived Analyis Projects (DAP)
3  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina HiSeq 2500
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Marine pelagic microbial communities from Tasman Sea - 102.100.100/35794
Other Names (alias, synonyms, short names)
  
Sample Description
Marine pelagic microbial communities from Tasman Sea  
SAMPLE TAXONOMY
NCBI Taxonomy ID 408172
GOLD CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Epipelagic  
Specific Ecosystem
  

 

 

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