PROJECT INFORMATION
GOLD Project ID
Gp0395920  
Project Name
Marine pelagic microbial communities from Maria Island, Australia - 102.100.100/21648  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Metagenome from Australian marine benthic and pelagic environments
NCBI BioProject ID 385736
NCBI BioProject Accession PRJNA385736
NCBI Locus Tag
  
NCBI BioSample Accession SAMN07483524
PI Andrew Bissett
Added By JGI automated process on 2019-02-04
Last Modified By
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Environmental
Sequencing Center Commonwealth Scientific and Industrial Research Organisation (CSIRO) (Australia)
Collaborating Institute
  
Funding Agency
  
Project Description
Marine pelagic microbial communities from Maria Island, Australia  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Biome
Nucleic Acid DNA
Sequencing Strategy
Metagenome  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX3498640  (Link to NCBI )
Experiment Title Marine_amplicon
Exp Library Strategy AMPLICON
Library Source METAGENOMIC
Library Selection PCR
Library Name 21648_18S_AGGNB_TCTGTTGCTCTC
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
 
SRA Experiment Id SRX3498288  (Link to NCBI )
Experiment Title Marine_amplicon
Exp Library Strategy AMPLICON
Library Source METAGENOMIC
Library Selection PCR
Library Name 21648_A16S_AG27L_TACGCTGCTTCTAGCT
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
 
SRA Experiment Id SRX3498642  (Link to NCBI )
Experiment Title Marine_amplicon
Exp Library Strategy AMPLICON
Library Source METAGENOMIC
Library Selection PCR
Library Name 21648_A16S_AG27L_TACGCTGCAAGGCTAT
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
 
SRA Experiment Id SRX3498641  (Link to NCBI )
Experiment Title Marine_amplicon
Exp Library Strategy AMPLICON
Library Source METAGENOMIC
Library Selection PCR
Library Name 21648_16S_AFGB7_GAGTGGTAGAGA
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
 
SRA Experiment Id SRX3498644  (Link to NCBI )
Experiment Title Marine_amplicon
Exp Library Strategy AMPLICON
Library Source METAGENOMIC
Library Selection PCR
Library Name 21648_16S_AFGB7_CTTCGGCAGAAT
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
 
SRA Experiment Id SRX3079505  (Link to NCBI )
Experiment Title Marine_amplicon
Exp Library Strategy AMPLICON
Library Source METAGENOMIC
Library Selection PCR
Library Name 21648_A16S_AG27L_TACGCTGCTTCTAGCT
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
 
SRA Experiment Id SRX3079506  (Link to NCBI )
Experiment Title Marine_amplicon
Exp Library Strategy AMPLICON
Library Source METAGENOMIC
Library Selection PCR
Library Name 21648_18S_AGGNB_ACCACATACATC
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
 
SRA Experiment Id SRX3079503  (Link to NCBI )
Experiment Title Marine_amplicon
Exp Library Strategy AMPLICON
Library Source METAGENOMIC
Library Selection PCR
Library Name 21648_16S_AFGB7_GAGTGGTAGAGA
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
 
SRA Experiment Id SRX3079504  (Link to NCBI )
Experiment Title Marine_amplicon
Exp Library Strategy AMPLICON
Library Source METAGENOMIC
Library Selection PCR
Library Name 21648_A16S_AG27L_TACGCTGCAAGGCTAT
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
 
SRA Experiment Id SRX3079641  (Link to NCBI )
Experiment Title Marine_metagenomics
Exp Library Strategy WGS
Library Source METAGENOMIC
Library Selection PCR
Library Name 102.100.100/21648
Library Layout PAIRED
Library Instrument ILLUMINA_HI_SEQ_2500
 
SRA Experiment Id SRX3079502  (Link to NCBI )
Experiment Title Marine_amplicon
Exp Library Strategy AMPLICON
Library Source METAGENOMIC
Library Selection PCR
Library Name 21648_16S_AFGB7_CTTCGGCAGAAT
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
 
SRA Experiment Id SRX3079642  (Link to NCBI )
Experiment Title Marine_amplicon
Exp Library Strategy AMPLICON
Library Source METAGENOMIC
Library Selection PCR
Library Name 21648_18S_AGGNB_TCTGTTGCTCTC
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
 
SRA Experiment Id SRX3498639  (Link to NCBI )
Experiment Title Marine_amplicon
Exp Library Strategy AMPLICON
Library Source METAGENOMIC
Library Selection PCR
Library Name 21648_18S_AGGNB_ACCACATACATC
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
PROJECT COMPOSITION
Study Marine microbial communities from benthic and pelagic environments in Australia
Biosample Marine pelagic microbial communities from Maria Island, Australia - 102.100.100/21648
Analysis Projects Marine pelagic microbial communities from Maria Island, Australia - 102.100.100/21648
Combined Assembly of marine microbial communities from pelagic environments in Australia
Number of Analysis Projects (AP)
2  
Number of Derived Analyis Projects (DAP)
3  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina HiSeq 2500
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Marine pelagic microbial communities from Maria Island, Australia - 102.100.100/21648
Other Names (alias, synonyms, short names)
  
Sample Description
Marine pelagic microbial communities from Maria Island, Australia  
SAMPLE TAXONOMY
NCBI Taxonomy ID 408172
GOLD CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Pelagic  
Specific Ecosystem
  

 

 

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