PROJECT INFORMATION
GOLD Project ID
Gp0395101  
Project Name
Human adult male fecal microbial communities from Ikoma, Japan - F1-S  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name 13 Healthy Human Gut Metagenomes
NCBI BioProject Accession PRJNA28117
NCBI Locus Tag
  
NCBI BioSample Accession SAMD00036524
Source Sample ID
PI Masahira Hattori
Added By JGI automated process on 2019-01-30
Last Modified By
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center The University of Tokyo (Japan)
Collaborating Institute
  
Funding Agency
  
Project Description
Human adult male fecal microbial communities from Ikoma, Japan  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Biome
Nucleic Acid DNA
Sequencing Strategy
Metagenome  
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
  
JGI Award DOI
Genome Publications
  
Other Publications
  
Ignored Publications
  
Unassigned Publications DNA research : an international journal for rapid publication of reports on genes and genomes: Comparative metagenomics revealed commonly enriched gene sets in human gut microbiomes.
PubMed: 17916580
SRA Experiment
  
PROJECT COMPOSITION
Study Human fecal microbial communities from Ikoma, Japan
Biosample Human adult male fecal microbial communities from Ikoma, Japan - F1-S
Analysis Projects Human adult male fecal microbial communities from Ikoma, Japan - F1-S
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Sorting Technology
  
Single Cell Lysis Protocol
  
Single Cell Lysis Approach
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Human adult male fecal microbial communities from Ikoma, Japan - F1-S
Other Names (alias, synonyms, short names)
  
Sample Description
Human adult male fecal microbial communities from Ikoma, Japan  
SAMPLE TAXONOMY
NCBI Taxonomy ID
GOLD CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Mammals: Human  
Ecosystem Type
Digestive system  
Ecosystem Subtype
Large intestine  
Specific Ecosystem
Fecal  

 

 

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