PROJECT INFORMATION
GOLD Project ID
Gp0395068  
Project Name
Infant fecal microbial communities from premature female in Chicago, USA - carrol  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Metagenomic analysis of infant stool sample
NCBI BioProject ID 60717
NCBI BioProject Accession PRJNA60717
NCBI Locus Tag
  
NCBI BioSample Accession SAMN00990124
PI Jill Banfield
Added By JGI automated process on 2019-01-30
Last Modified By
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center University of California, Berkeley (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
Infant fecal microbial communities from premature female in Chicago, USA  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Biome
Nucleic Acid DNA
Sequencing Strategy
Metagenome  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX144807  (Link to NCBI )
Experiment Title Preborn infant gut metagenome - Carrol stool sample
Exp Library Strategy WGS
Library Source METAGENOMIC
Library Selection RANDOM
Library Name carrol stool sample
Library Layout PAIRED
Library Instrument ILLUMINA_HI_SEQ_2000
PROJECT COMPOSITION
Study Infant fecal microbial communities from premature female in Chicago, USA
Biosample Infant fecal microbial communities from premature female in Chicago, USA - carrol
Analysis Projects Infant fecal microbial communities from premature female in Chicago, USA - carrol
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) ILLUMINA_HI_SEQ_2000
ILLUMINA_HI_SEQ_2000
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Infant fecal microbial communities from premature female in Chicago, USA - carrol
Other Names (alias, synonyms, short names)
  
Sample Description
Infant fecal microbial communities from premature female in Chicago, USA  
SAMPLE TAXONOMY
NCBI Taxonomy ID
GOLD CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Digestive system  
Ecosystem Subtype
Large intestine  
Specific Ecosystem
Fecal  

 

 

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