PROJECT INFORMATION
GOLD Project ID
Gp0393666  
Project Name
Marichromatium sp. AB32  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Marichromatium sp. AB32
NCBI BioProject ID 498232
NCBI BioProject Accession PRJNA498232
NCBI Locus Tag
EBL85  
NCBI BioSample Accession SAMN10285743
PI
Added By JGI automated process on 2019-01-17
Last Modified By Supratim Mukherjee on 2021-03-25
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Environmental
Sequencing Center Washington University in St. Louis (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
Marichromatium sp. AB32 genome sequencing  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Microbiol Resour Announc Isolates, Photosynthetic Gammaproteobacteria from Marine Ecosystems.

Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX4934241  (Link to NCBI )
Experiment Title WGS of Marichromatium sp. AB32: a marine anoxygenic phototroph
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name 25295
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
PROJECT COMPOSITION
Study Marichromatium sp. AB32 genome sequencing
Organism Marichromatium sp. AB32
Analysis Projects Marichromatium sp. AB32
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) Illumina MiSeq
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0508945
Organism Name
Marichromatium sp. AB32  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Marichromatium  
Genus Synonyms
  
Species
Marichromatium sp. AB32  
Subspecies
  
Species Synonyms
  
Strain
AB32  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 2483363
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Chromatiales  
NCBI Family
Chromatiaceae  
NCBI Genus
Marichromatium  
NCBI Species
Marichromatium sp. AB32  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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