PROJECT INFORMATION
GOLD Project ID
Gp0392029  
Project Name
Haemophilus influenzae M38052  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Bacteria
NCBI BioProject ID 428178
NCBI BioProject Accession PRJNA428178
NCBI Locus Tag
DV409  
NCBI BioSample Accession SAMN09704936
PI
Added By JGI automated process on 2019-01-17
Last Modified By
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center Centers for Disease Control and Prevention
Collaborating Institute
  
Funding Agency
  
Project Description
Haemophilus influenzae M38052 genome sequencing  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications BMC Infect. Dis. 18(1):405 BMScan: using whole genome similarity to rapidly and accurately identify bacterial meningitis causing species.

Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Sequencing of bacterial meningitis causing and other closely related species
Organism Haemophilus influenzae M38052
Analysis Projects Haemophilus influenzae M38052
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina MiSeq
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0507333
Organism Name
Haemophilus influenzae M38052  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Haemophilus  
Genus Synonyms
  
Species
Haemophilus influenzae  
Subspecies
  
Species Synonyms
  
Strain
M38052  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 727
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Pasteurellales  
NCBI Family
Pasteurellaceae  
NCBI Genus
Haemophilus  
NCBI Species
Haemophilus influenzae  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  Changing the SP visibility will also change visibility on the following items:

 

Do you want to continue with this visibility change?

 

 

  Checking that this Sequencing Project can be made private:

 

Do you want to continue with this visibility change?

 

 

 

 

 

  Changing the SP Sequencing Strategy will also effect these items:

 

Do you want to continue with this Sequencing Strategy change?