PROJECT INFORMATION
GOLD Project ID
Gp0383054  
Project Name
Curtobacterium pusillum WPL5_2  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Curtobacterium pusillum WPL5_2
NCBI BioProject Accession PRJNA547131
NCBI Locus Tag
FHW23  
NCBI BioSample Accession SAMN12024822
PI Carolin Frank
Added By JGI automated process on 2019-01-04
Last Modified By JGI automated process on 2022-09-04
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Curtobacterium pusillum WPL5_2 genome sequencing. Sample from Populus trichocarpa leaf  
Is JGI Project
Yes  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
Unrestricted  
JGI Award DOI 10.46936/10.25585/60000936
JGI Portal Download Raw Sequence Data
Genome Publications
  
Other Publications
  
Ignored Publications
  
Unassigned Publications
  
SRA Experiment
 
SRA Experiment Id SRX6875734  (Link to NCBI )
Experiment Title Curtobacterium pusillum WPL5_2
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name GCTWW
Library Layout PAIRED
PROJECT COMPOSITION
Study Above-ground endophytic microbial communities from plants in different locations in the United States
Organism Curtobacterium pusillum WPL5_2
Analysis Projects Curtobacterium pusillum WPL5_2
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal Level 1: Standard Draft
Contamination Screening Input
  
DNA Amplification Method
  
Single Cell Lysis Protocol
  
Single Cell Lysis Approach
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) Illumina NovaSeq
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0498807
Organism Name
Curtobacterium pusillum WPL5_2  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
ACTINOBACTERIA  
Genus
Curtobacterium  
Genus Synonyms
  
Species
Curtobacterium pusillum  
Subspecies
  
Species Synonyms
  
Strain
WPL5_2  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 69373
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Actinobacteria  
NCBI Class
Actinomycetia  
NCBI Order
Micrococcales  
NCBI Family
Microbacteriaceae  
NCBI Genus
Curtobacterium  
NCBI Species
Curtobacterium pusillum  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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