PROJECT INFORMATION
GOLD Project ID
Gp0371785  
Project Name
Sphingosinicella vermicomposti KCTC 22446  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Sphingosinicella vermicomposti KCTC 22446
NCBI BioProject ID 438216
NCBI BioProject Accession PRJNA438216
NCBI Locus Tag
C7I56  
NCBI BioSample Accession SAMN08707967
PI
Added By JGI automated process on 2018-12-21
Last Modified By Supratim Mukherjee on 2019-01-03
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center Chinese Academy of Forestry
Collaborating Institute
  
Funding Agency
  
Project Description
Sphingosinicella vermicomposti KCTC 22446 genome sequencing  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Sphingosinicella vermicomposti KCTC 22446 genome sequencing
Organism Sphingosinicella vermicomposti KCTC 22446
Analysis Projects Sphingosinicella vermicomposti KCTC 22446
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) Illumina HiSeq
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0487998
Organism Name
Sphingosinicella vermicomposti KCTC 22446  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ALPHA  
Genus
Sphingosinicella  
Genus Synonyms
  
Species
Sphingosinicella vermicomposti  
Subspecies
  
Species Synonyms
  
Strain
KCTC 22446  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
KCTC 22446  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 614671
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Alphaproteobacteria  
NCBI Order
Sphingomonadales  
NCBI Family
Sphingosinicellaceae  
NCBI Genus
Sphingosinicella  
NCBI Species
Sphingosinicella vermicomposti  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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