PROJECT INFORMATION
GOLD Project ID
Gp0345055  
Project Name
Moorella thermoacetica ATCC 39073 transcriptome - 39073_3  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Moorella thermoacetica ATCC 39073 transcriptome - 39073_3
NCBI BioProject ID 499255
NCBI BioProject Accession PRJNA499255
NCBI Locus Tag
  
NCBI BioSample Accession SAMN10360983
PI Adam Guss
Added By JGI automated process on 2018-10-26
Last Modified By JGI automated process on 2019-06-18
Project Comments
  
Project Status
incomplete  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Transcriptome sequencing of evolved Clostridium thermocellum mutants  
Is JGI Project
Yes  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid RNA
Sequencing Strategy
Transcriptome  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX5081683  (Link to NCBI )
Experiment Title Moorella thermoacetica ATCC 39073 transcriptomics
Exp Library Strategy RNA_SEQ
Library Source TRANSCRIPTOMIC
Library Selection other
Library Name BXGGS
Library Layout PAIRED
Library Instrument ILLUMINA_HI_SEQ_2500
PROJECT COMPOSITION
Study Genome and transcriptome sequencing of evolved Clostridium thermocellum mutants and other biofuel strains
Organism Moorella thermoacetica ATCC 39073
Analysis Projects Moorella thermoacetica ATCC 39073 transcriptome - 39073_3
Number of Analysis Projects (AP)
1  
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina HiSeq 2500-1TB
Library Method (MIGS-28)
Illumina Low Input RNASeq w/rRNA Depletion, Plates  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
56  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0000333
Organism Name
Moorella thermoacetica ATCC 39073  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Moorella  
Genus Synonyms
  
Species
Moorella thermoacetica  
Subspecies
  
Species Synonyms
  
Strain
ATCC 39073  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
ATCC 39073  
Type Strain
No  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
1  
Organism Comments
Moorella thermoacetica ATCC 39073  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1525
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Clostridia  
NCBI Order
Thermoanaerobacterales  
NCBI Family
Thermoanaerobacteraceae  
NCBI Genus
Moorella  
NCBI Species
Moorella thermoacetica  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Freshwater  
Ecosystem Subtype
Pond  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 111654
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
  
Motility
  
Sporulation
Sporulating  
Temperature Range
Thermophile  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Fresh water
Ponds
Metabolisms Carbon dioxide fixation
Acetogen
Phenotypes
  
Energy Sources
  

 

 

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