PROJECT INFORMATION
GOLD Project ID
Gp0333686  
Project Name
Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE4  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE4
NCBI BioProject ID 570526
NCBI BioProject Accession PRJNA570526
NCBI Locus Tag
F5W39  
NCBI BioSample Accession SAMN12813584
PI Petr Baldrian
Added By JGI automated process on 2018-10-11
Last Modified By JGI automated process on 2020-04-04
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Spruce roots microbial communities from Maridalen valley, Oslo, Norway  
Is JGI Project
Yes  
Project Information Visibility Public
PROJECT TYPE
Specimen Biome
Nucleic Acid DNA
Sequencing Strategy
Metagenome  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX7531670  (Link to NCBI )
Experiment Title NRE4 metagenome
Exp Library Strategy WGS
Library Source METAGENOMIC
Library Selection RANDOM
Library Name GAHOA
Library Layout PAIRED
Library Instrument ILLUMINA_HI_SEQ_2500
PROJECT COMPOSITION
Study Soil, plant litter and rhizosphere microbial communities from European coniferous forests
Biosample Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE4
Analysis Projects FICUS49499 Metagenome Norway combined assembly
Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE4
Number of Analysis Projects (AP)
2  
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal Level 1: Standard Draft
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina HiSeq 2500-1TB
Library Method (MIGS-28)
Illumina Regular Fragment, 300bp, Tubes  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE4
Other Names (alias, synonyms, short names)
  
Sample Description
Spruce roots microbial communities from Maridalen valley, Oslo, Norway  
SAMPLE TAXONOMY
NCBI Taxonomy ID 1118232
GOLD CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Plants  
Ecosystem Type
Roots  
Ecosystem Subtype
  
Specific Ecosystem
  

 

 

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