PROJECT INFORMATION
GOLD Project ID
Gp0325139  
Project Name
Pseudokineococcus lusitanus DSM 23768  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Pseudokineococcus lusitanus DSM 23768
NCBI BioProject ID 537953
NCBI BioProject Accession PRJNA537953
NCBI Locus Tag
FB383  
NCBI BioSample Accession SAMN11513127
PI Hans-Peter Klenk
Added By JGI automated process on 2018-08-15
Last Modified By JGI automated process on 2019-09-29
Project Comments
  
Project Status
targeted  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Sequencing of Actinobacteria genome as a plant growth promoter and producer of natural products and energy relevant enzymes  
Is JGI Project
Yes  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX5798512  (Link to NCBI )
Experiment Title Pseudokineococcus lusitanus DSM 23768
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name GCPTA
Library Layout SINGLE
 
SRA Experiment Id SRX5798511  (Link to NCBI )
Experiment Title Pseudokineococcus lusitanus DSM 23768
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name GCPTA
Library Layout SINGLE
PROJECT COMPOSITION
Study Sequencing the genomes of 1000 actinobacteria strains
Organism Pseudokineococcus lusitanus CECT 7306
Analysis Projects Pseudokineococcus lusitanus DSM 23768
Number of Analysis Projects (AP)
1  
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Awaiting Sample
Sequencing Quality (MIGS-31) Level 3: Improved-High-Quality Draft
Finishing Goal Level 3: Improved-High-Quality Draft
Sequencing Comments
  
Sequencing Technology (MIGS-29) PacBio Sequel II
PacBio Sequel
PacBio RS II
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0031650
Organism Name
Pseudokineococcus lusitanus CECT 7306  
Other names (alias, synonyms, short names, common names)
Pseudokineococcus lusitanus DSM 23768  
Organism Domain
BACTERIAL  
Phylogeny
ACTINOBACTERIA  
Genus
Pseudokineococcus  
Genus Synonyms
  
Species
Pseudokineococcus lusitanus  
Subspecies
  
Species Synonyms
  
Strain
CECT 7306  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
CECT 7306  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.22592  
Exemplar Name
Pseudokineococcus lusitanus  
Taxon DOI
10.1601/tx.22592  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 763993
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Actinobacteria  
NCBI Class
Actinobacteria  
NCBI Order
Kineosporiales  
NCBI Family
Kineosporiaceae  
NCBI Genus
Pseudokineococcus  
NCBI Species
Pseudokineococcus lusitanus  
ISOLATION CLASSIFICATION
Ecosystem
Engineered  
Ecosystem Category
Built environment  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Coccus-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
1.0–1.5 µm  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Tetrads
Singles
Pairs
Clusters
Diseases
  
Known Habitats Biofilm
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  Changing the SP visibility will also change visibility on the following items:

 

Do you want to continue with this visibility change?

 

 

  Checking that this Sequencing Project can be made private:

 

Do you want to continue with this visibility change?

 

 

 

 

 

  Changing the SP Sequencing Strategy will also effect these items:

 

Do you want to continue with this Sequencing Strategy change?