PROJECT INFORMATION
GOLD Project ID
Gp0324049  
Project Name
Metatranscriptome of bulk soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_194  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_194
NCBI BioProject Accession PRJNA622067
NCBI Locus Tag
HEB62  
NCBI BioSample Accession SAMN14514883
PI Eoin Brodie
Added By JGI automated process on 2018-07-12
Last Modified By JGI automated process on 2021-11-07
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Metatranscriptome of bulk soil microbial communities from the East River watershed near Crested Butte, Colorado, United States  
Is JGI Project
Yes  
Project Information Visibility Public
PROJECT TYPE
Specimen Biome
Nucleic Acid RNA
Sequencing Strategy
Metatranscriptome  
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
Unrestricted  
JGI Award DOI 10.46936/fics.proj.2017.49991/60006232
JGI Portal Download Raw Sequence Data
Genome Publications
  
Other Publications
  
Ignored Publications
  
Unassigned Publications
  
SRA Experiment
 
SRA Experiment Id SRX8134329  (Link to NCBI )
Experiment Title ER_RNA_194
Exp Library Strategy RNA_SEQ
Library Source METATRANSCRIPTOMIC
Library Selection RT-PCR
Library Name CWSPB
Library Layout PAIRED
PROJECT COMPOSITION
Study Bulk soil microbial communities from the East River watershed near Crested Butte, Colorado, United States
Biosample Bulk soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_194
Analysis Projects Metatranscriptome of bulk soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_194 (Metagenome Metatranscriptome Expression - Other)
Metatranscriptome of bulk soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_194 (Metagenome Metatranscriptome)
Metatranscriptome of bulk soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_194 (Metagenome Metatranscriptome Expression - Other)
Number of Analysis Projects (AP) 3
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Single Cell Lysis Protocol
  
Single Cell Lysis Approach
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) Illumina NovaSeq
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Bulk soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_194
Other Names (alias, synonyms, short names)
  
Sample Description
Bulk soil microbial communities from the East River watershed near Crested Butte, Colorado, United States  
SAMPLE TAXONOMY
NCBI Taxonomy ID 410658
GOLD CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Soil  
Ecosystem Subtype
Floodplain  
Specific Ecosystem
  

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  Changing the SP visibility will also change visibility on the following items:

 

Do you want to continue with this visibility change?

 

 

  Checking that this Sequencing Project can be made private:

 

Do you want to continue with this visibility change?

 

 

 

 

 

  Changing the SP Sequencing Strategy will also effect these items:

 

Do you want to continue with this Sequencing Strategy change?