PROJECT INFORMATION
GOLD Project ID
Gp0323892  
Project Name
Saline water microbial communities from Organic Lake, Antarctica - #714  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Saline water microbial communities from Organic Lake, Antarctica - #714
NCBI BioProject ID 518626
NCBI BioProject Accession PRJNA518626
NCBI Locus Tag
EVQ94  
NCBI BioSample Accession SAMN10864301
PI Rick Cavicchioli
Added By JGI automated process on 2018-07-12
Last Modified By JGI automated process on 2020-04-04
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Saline water microbial communities from Organic Lake, Antarctica  
Is JGI Project
Yes  
Project Information Visibility Public
PROJECT TYPE
Specimen Biome
Nucleic Acid DNA
Sequencing Strategy
Metagenome  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX5649539  (Link to NCBI )
Experiment Title Organic Lake metagenome #714
Exp Library Strategy WGS
Library Source METAGENOMIC
Library Selection RANDOM
Library Name CUZOB
Library Layout PAIRED
PROJECT COMPOSITION
Study Saline lake microbial communities from various lakes in Antarctica
Biosample Saline water microbial communities from Organic Lake, Antarctica - #714
Analysis Projects Saline water microbial communities from Organic Lake, Antarctica - #714
Number of Analysis Projects (AP)
1  
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal Level 1: Standard Draft
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina NovaSeq
Library Method (MIGS-28)
Illumina Regular Fragment, 300bp, Plates  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Saline water microbial communities from Organic Lake, Antarctica - #714
Other Names (alias, synonyms, short names)
  
Sample Description
Saline water microbial communities from Organic Lake, Antarctica  
SAMPLE TAXONOMY
NCBI Taxonomy ID 903395
GOLD CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Non-marine Saline and Alkaline  
Ecosystem Subtype
Saline  
Specific Ecosystem
  

 

 

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