PROJECT INFORMATION
GOLD Project ID
Gp0323317  
Project Name
Bombella intestini R-52487  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Bombella intestini R-52487 genome sequencing
NCBI BioProject ID 235371
NCBI BioProject Accession PRJNA235371
NCBI Locus Tag
AL01  
NCBI BioSample Accession SAMN02598725
PI
Added By JGI automated process on 2018-07-12
Last Modified By
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Environmental
Sequencing Center Ghent University (Belgium)
Collaborating Institute
  
Funding Agency
  
Project Description
Bombella intestini R-52487 genome sequencing  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications PloS one 11(11):e0165611 Whole-Genome Sequence Analysis of Bombella intestini LMG 28161T, a Novel Acetic Acid Bacterium Isolated from the Crop of a Red-Tailed Bumble Bee, Bombus lapidarius.

Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Bombella intestini R-52487 genome sequencing
Organism Bombella intestini R-52487
Analysis Projects Bombella intestini R-52487
Number of Analysis Projects (AP)
1  
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina HiSeq
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0454991
Organism Name
Bombella intestini R-52487  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ALPHA  
Genus
Bombella  
Genus Synonyms
  
Species
Bombella intestini  
Subspecies
  
Species Synonyms
  
Strain
R-52487  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
LMG 28161  
Type Strain
  
Exemplar DOI
10.1601/ex.26247  
Exemplar Name
Bombella intestini  
Taxon DOI
10.1601/tx.26247  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1539051
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Alphaproteobacteria  
NCBI Order
Rhodospirillales  
NCBI Family
Acetobacteraceae  
NCBI Genus
Bombella  
NCBI Species
Bombella intestini  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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