PROJECT INFORMATION
GOLD Project ID
Gp0322539  
Project Name
Freshwater lake microbial community from Lake Baikal Russia - 20m  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Lake water metagenome
NCBI BioProject ID 396997
NCBI BioProject Accession PRJNA396997
NCBI Locus Tag
  
NCBI BioSample Accession SAMN07445447
PI Alejandro Rodriguez Mojica
Added By Alejandro Rodriguez Mojica on 2018-07-06
Last Modified By Supratim Mukherjee on 2018-07-06
Project Comments
  
Project Status
incomplete  
Project Relevance
  
Sequencing Center University Miguel Hernadez
Collaborating Institute
  
Funding Agency
  
Project Description
Freshwater lake microbial community from Lake Baikal Russia from 20m depth  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Biome
Nucleic Acid DNA
Sequencing Strategy
Metagenome  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX3061679  (Link to NCBI )
Experiment Title Lake Baikal March 2016 - 20 m 0.22 micron metagenome
Exp Library Strategy WGS
Library Source METAGENOMIC
Library Selection RANDOM
Library Name Lake Baikal - 20 m
Library Layout PAIRED
Library Instrument ILLUMINA_HI_SEQ_4000
PROJECT COMPOSITION
Study Freshwater lake microbial community from Lake Baikal Russia
Biosample Freshwater lake microbial community from Lake Baikal Russia - 20m
Analysis Projects Combined Assembly of freshwater lake microbial community from Lake Baikal Russia
Number of Analysis Projects 1
Number of DAPs
1  
SEQUENCING INFORMATION
Sequencing Status In progress
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal Level 1: Standard Draft
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina HiSeq 4000
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Freshwater lake microbial community from Lake Baikal Russia - 20m
Other Names (alias, synonyms, short names)
  
Sample Description
Freshwater lake microbial community from Lake Baikal Russia from 20m depth  
SAMPLE TAXONOMY
NCBI Taxonomy ID
GOLD CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Freshwater  
Ecosystem Subtype
Lake  
Specific Ecosystem
  

 

 

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