PROJECT INFORMATION
GOLD Project ID
Gp0321295  
Project Name
Bulk soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195
NCBI BioProject Accession PRJNA518584
NCBI Locus Tag
EVQ52  
NCBI BioSample Accession SAMN10864333
Source Sample ID
PI Eoin Brodie
Added By JGI automated process on 2018-06-22
Last Modified By JGI automated process on 2023-05-04
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Bulk soil microbial communities from the East River watershed near Crested Butte, Colorado, United States  
Is JGI Project
Yes  
Project Information Visibility Public
PROJECT TYPE
Specimen Biome
Nucleic Acid DNA
Sequencing Strategy
Metagenome  
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
Unrestricted  
JGI Award DOI 10.46936/fics.proj.2017.49991/60006232
JGI Portal Download Raw Sequence Data
Genome Publications
  
Other Publications
  
Ignored Publications
  
Unassigned Publications
  
SRA Experiment
 
SRA Experiment Id SRX5355399  (Link to NCBI )
Experiment Title ER_DNA_195
Exp Library Strategy WGS
Library Source METAGENOMIC
Library Selection RANDOM
Library Name CTZGS
Library Layout PAIRED
PROJECT COMPOSITION
Study Bulk soil microbial communities from the East River watershed near Crested Butte, Colorado, United States
Biosample Bulk soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_195
Analysis Projects Combined assembly ER_DNA
Bulk soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195
Bulk soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195 NMDC pilot
Number of Analysis Projects (AP) 3
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal Level 1: Standard Draft
Contamination Screening Input
  
DNA Amplification Method
  
Sorting Technology
  
Single Cell Lysis Protocol
  
Single Cell Lysis Approach
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) Illumina NovaSeq
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Bulk soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_195
Other Names (alias, synonyms, short names)
  
Sample Description
Bulk soil microbial communities from the East River watershed near Crested Butte, Colorado, United States  
SAMPLE TAXONOMY
NCBI Taxonomy ID 410658
GOLD CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Soil  
Ecosystem Subtype
Floodplain  
Specific Ecosystem
  

 

 

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