PROJECT INFORMATION
GOLD Project ID
Gp0317165  
Project Name
Fabibacter misakiensis SK-8  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Fabibacter misakiensis SK-8 genome sequencing
NCBI BioProject ID 338728
NCBI BioProject Accession PRJNA338728
NCBI Locus Tag
BFP71  
NCBI BioSample Accession SAMN05567582
PI
Added By JGI automated process on 2018-05-24
Last Modified By Hema Katta on 2019-01-22
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Environmental
Sequencing Center The University of Tokyo
Collaborating Institute
  
Funding Agency
  
Project Description
Bacteria isolated from the sea surface microlayer and underlying water of Aburatsubo Inlet, Misaki, Japan  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Genome announcements Draft Genome Sequences of Two Fabibacter sp. Strains Isolated from Coastal Surface Water of Aburatsubo Inlet, Japan.

Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Genome sequencing and assembly of bacterial isolates from the sea surface microlayer and underlying water of Aburatsubo Inlet
Organism Fabibacter misakiensis SK-8
Analysis Projects Fabibacter misakiensis SK-8
Number of Analysis Projects (AP)
1  
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina MiSeq
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0452726
Organism Name
Fabibacter misakiensis SK-8  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
BACTEROIDETES  
Genus
Fabibacter  
Genus Synonyms
  
Species
Fabibacter misakiensis  
Subspecies
  
Species Synonyms
  
Strain
SK-8  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
10.1601/ex.27422  
Exemplar Name
Roseivirga misakiensis  
Taxon DOI
10.1601/tx.36452  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1563681
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Bacteroidetes  
NCBI Class
Cytophagia  
NCBI Order
Cytophagales  
NCBI Family
Flammeovirgaceae  
NCBI Genus
Fabibacter  
NCBI Species
Fabibacter misakiensis  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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