PROJECT INFORMATION
GOLD Project ID
Gp0315393  
Project Name
Elusimicrobium sp. An273  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Elusimicrobium sp. An273 genome sequencing
NCBI BioProject Accession PRJNA377666
NCBI Locus Tag
  
NCBI BioSample Accession SAMN06473703
Source Sample ID
PI Unknown
Added By JGI automated process on 2018-05-24
Last Modified By
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center Veterinary Research Institute
Collaborating Institute
  
Funding Agency
  
Project Description
Elusimicrobium sp. An273 genome sequencing  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
  
JGI Award DOI
Genome Publications BMC genomics: 19(1):561 Whole genome sequencing and function prediction of 133 gut anaerobes isolated from chicken caecum in pure cultures.
PubMed: 30064352 DOI: 10.1186/s12864-018-4959-4
Other Publications
  
Ignored Publications
  
Unassigned Publications Scientific reports: 11(1):3290 The distribution of antibiotic resistance genes in chicken gut microbiota commensals.
PubMed: 33558560 DOI: 10.1038/s41598-021-82640-3
SRA Experiment
 
SRA Experiment Id SRX2641120  (Link to NCBI )
Experiment Title WGS on Elusimicrobium_minutum_An273
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name An273
Library Layout PAIRED
Library Instrument NEXT_SEQ_500
PROJECT COMPOSITION
Study Whole genome sequencing of chicken gut anaerobes
Organism Elusimicrobium sp. An273
Analysis Projects Elusimicrobium sp. An273
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Single Cell Lysis Protocol
  
Single Cell Lysis Approach
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) Illumina NextSeq 500
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0450974
Organism Name
Elusimicrobium sp. An273  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
ELUSIMICROBIOTA  
Genus
Elusimicrobium  
Genus Synonyms
  
Species
Elusimicrobium sp. An273  
Subspecies
  
Species Synonyms
  
Strain
An273  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
Anaerobe  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1965617
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Elusimicrobiota  
NCBI Class
Elusimicrobia  
NCBI Order
Elusimicrobiales  
NCBI Family
Elusimicrobiaceae  
NCBI Genus
Elusimicrobium  
NCBI Species
Elusimicrobium sp. An273  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Birds  
Ecosystem Type
Digestive system  
Ecosystem Subtype
Large intestine  
Specific Ecosystem
Ceca  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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