PROJECT INFORMATION
GOLD Project ID
Gp0304924  
Project Name
Paeniglutamicibacter cryotolerans DSM 22826  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Paeniglutamicibacter cryotolerans DSM 22826
NCBI BioProject ID 533343
NCBI BioProject Accession PRJNA533343
NCBI Locus Tag
E9229  
NCBI BioSample Accession SAMN11457505
PI Hans-Peter Klenk
Added By JGI automated process on 2018-03-16
Last Modified By JGI automated process on 2020-05-16
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Sequencing of Actinobacteria genome as a plant growth promoter and producer of natural products and energy relevant enzymes  
Is JGI Project
Yes  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX5723690  (Link to NCBI )
Experiment Title Paeniglutamicibacter cryotolerans DSM 22826
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name GCAGO
Library Layout SINGLE
 
SRA Experiment Id SRX5723691  (Link to NCBI )
Experiment Title Paeniglutamicibacter cryotolerans DSM 22826
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name GCAGO
Library Layout SINGLE
PROJECT COMPOSITION
Study Sequencing the genomes of 1000 actinobacteria strains
Organism Paeniglutamicibacter cryotolerans DSM 22826
Analysis Projects Paeniglutamicibacter cryotolerans DSM 22826
Number of Analysis Projects (AP)
1  
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 3: Improved-High-Quality Draft
Finishing Goal Level 3: Improved-High-Quality Draft
Sequencing Comments
  
Sequencing Technology (MIGS-29) PacBio Sequel
PacBio RS II
Library Method (MIGS-28)
PacBio 6-10kb w/ Blue Pippin Size Selection, Tubes; PacBio >10kb w/ AMPure Bead Size Selection, Tubes; PacBio Multiplexed 10kb, Tubes  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0031818
Organism Name
Paeniglutamicibacter cryotolerans DSM 22826  
Other names (alias, synonyms, short names, common names)
Arthrobacter cryotolerans DSM 22826  
Organism Domain
BACTERIAL  
Phylogeny
ACTINOBACTERIA  
Genus
Paeniglutamicibacter  
Genus Synonyms
Arthrobacter  
Species
Paeniglutamicibacter cryotolerans  
Subspecies
  
Species Synonyms
  
Strain
DSM 22826  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
DSM 22826  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.21295  
Exemplar Name
Paeniglutamicibacter cryotolerans  
Taxon DOI
10.1601/tx.28373  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 670079
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Actinobacteria  
NCBI Class
Actinobacteria  
NCBI Order
Micrococcales  
NCBI Family
Micrococcaceae  
NCBI Genus
Paeniglutamicibacter  
NCBI Species
Paeniglutamicibacter cryotolerans  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Soil  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID GQ406812
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Psychrophile  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Soil
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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