PROJECT INFORMATION
GOLD Project ID
Gp0260931  
Project Name
Candidatus Sodalis sp. SoCistrobi 3249  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Genome sequencing of Candidatus Sodalis sp. SoCistrobi 3249
NCBI BioProject ID 354853
NCBI BioProject Accession PRJEB15507
NCBI Locus Tag
CINSTRO3249  
NCBI BioSample Accession SAMEA4560777
PI
Added By JGI automated process on 2017-11-09
Last Modified By
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center CBGP
Collaborating Institute
  
Funding Agency
  
Project Description
Genome sequencing of Candidatus Sodalis sp. SoCistrobi 3249  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Mol. Ecol. 26(8):2363-2378 Buchnera has changed flatmate but the repeated replacement of co-obligate symbionts is not associated with the ecological expansions of their aphid hosts.

Genome biology and evolution 10(9):2178-2189 A Freeloader? The Highly Eroded Yet Large Genome of the Serratia symbiotica Symbiont of Cinara strobi.

Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Genome sequencing of the endosymbiotic consortium and mitochondria of Cinara strobi
Organism Candidatus Sodalis sp. SoCistrobi 3249
Analysis Projects Candidatus Sodalis sp. SoCistrobi 3249
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0396503
Organism Name
Candidatus Sodalis sp. SoCistrobi 3249  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
  
Genus Synonyms
  
Species
Candidatus Sodalis sp. SoCistrobi 3249  
Subspecies
  
Species Synonyms
  
Strain
SoCistrobi 3249  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1922216
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Enterobacterales  
NCBI Family
Bruguierivoracaceae  
NCBI Genus
Sodalis  
NCBI Species
Candidatus Sodalis sp. SoCistrobi  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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