PROJECT INFORMATION
GOLD Project ID
Gp0260652  
Project Name
Methanopyrus sp. SNP6  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Genome sequencing of Methanopyrus sp. SNP6
NCBI BioProject ID 362704
NCBI BioProject Accession PRJNA362704
NCBI Locus Tag
BW921  
NCBI BioSample Accession SAMN06246566
PI
Added By JGI automated process on 2017-11-09
Last Modified By JGI automated process on 2017-11-10
Project Comments
  
Project Status
Complete and Published  
Project Relevance
  
Sequencing Center Zhejiang University (China)
Collaborating Institute
  
Funding Agency
  
Project Description
Genome sequencing of Methanopyrus sp. SNP6  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Frontiers in microbiology Comparative Genomics of Methanopyrus sp. SNP6 and KOL6 Revealing Genomic Regions of Plasticity Implicated in Extremely Thermophilic Profiles.

Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Genome sequencing of Methanopyrus sp. SNP6
Organism Methanopyrus sp. SNP6
Analysis Projects Methanopyrus sp. SNP6
Number of Analysis Projects (AP)
1  
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Contamination Screening Input
  
DNA Amplification Method
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) Illumina
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0396253
Organism Name
Methanopyrus sp. SNP6  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
ARCHAEAL  
Phylogeny
EURYARCHAEOTA-METHANOPYRI  
Genus
Methanopyrus  
Genus Synonyms
  
Species
Methanopyrus sp. SNP6  
Subspecies
  
Species Synonyms
  
Strain
SNP6  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1937005
NCBI Superkingdom
Archaea  
NCBI Kingdom
  
NCBI Phylum
Euryarchaeota  
NCBI Class
Methanopyri  
NCBI Order
Methanopyrales  
NCBI Family
Methanopyraceae  
NCBI Genus
Methanopyrus  
NCBI Species
Methanopyrus sp. SNP6  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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