PROJECT INFORMATION
GOLD Project ID
Gp0223601  
Project Name
Desulfofaba hansenii DSM 12642  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name
  
NCBI BioProject ID
NCBI BioProject Accession
NCBI Locus Tag
  
NCBI BioSample Accession
PI Xianzhe Gong
Added By Xianzhe Gong on 2017-07-18
Last Modified By Galina Ovchinnikova on 2017-07-19
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center Aarhus University (Denmark)
Collaborating Institute
  
Funding Agency
  
Project Description
Genome of Desulfofaba hansenii isolated from eelgrass Zostera marina  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Desulfofaba hansenii isolated from roots of the eelgrass Zostera marina
Organism Desulfofaba hansenii DSM 12642
Analysis Projects Desulfofaba hansenii DSM 12642
Number of Analysis Projects (AP)
1  
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 2: High-Quality Draft
Finishing Goal Level 1: Standard Draft
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina MiSeq
Library Method (MIGS-28)
Nextera XT Library Preparation Kit  
Number Of Reads
20690602  
Read Size
300  
Vector
  
GC Percent
50  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0027776
Organism Name
Desulfofaba hansenii DSM 12642  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-DELTA  
Genus
Desulfofaba  
Genus Synonyms
  
Species
Desulfofaba hansenii  
Subspecies
  
Species Synonyms
  
Strain
DSM 12642  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
DSM 12642  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.3578  
Exemplar Name
Desulfofaba hansenii  
Taxon DOI
10.1601/tx.3573  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 157842
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Deltaproteobacteria  
NCBI Order
Desulfobacterales  
NCBI Family
Desulfobacteraceae  
NCBI Genus
Desulfofaba  
NCBI Species
Desulfofaba hansenii  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Plants  
Ecosystem Type
Roots  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID AF321820
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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