PROJECT INFORMATION
GOLD Project ID
Gp0220509  
Project Name
Saccharothrix australiensis DSM 43800  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Saccharothrix australiensis DSM 43800
NCBI BioProject Accession PRJNA442832
NCBI Locus Tag
C8E97  
NCBI BioSample Accession SAMN08778305
PI Hans-Peter Klenk
Added By JGI automated process on 2017-06-29
Last Modified By JGI automated process on 2021-11-06
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Sequencing of Actinobacteria genome as a plant growth promoter and producer of natural products and energy relevant enzymes  
Is JGI Project
Yes  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
Restricted  
JGI Award DOI 10.46936/10.25585/60001044
JGI Portal Download Raw Sequence Data
Genome Publications
  
Other Publications
  
Ignored Publications
  
Unassigned Publications
  
SRA Experiment
 
SRA Experiment Id SRX3982068  (Link to NCBI )
Experiment Title Saccharothrix australiensis DSM 43800
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name BZGTU
Library Layout SINGLE
Library Instrument PAC_BIO_RS_II
 
SRA Experiment Id SRX3982069  (Link to NCBI )
Experiment Title Saccharothrix australiensis DSM 43800
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name BZGTU
Library Layout SINGLE
Library Instrument PAC_BIO_RS_II
PROJECT COMPOSITION
Study Sequencing the genomes of 1000 actinobacteria strains
Organism Saccharothrix australiensis DSM 43800
Analysis Projects Saccharothrix australiensis DSM 43800
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 3: Improved-High-Quality Draft
Finishing Goal Level 3: Improved-High-Quality Draft
Contamination Screening Input
  
DNA Amplification Method
  
Single Cell Lysis Protocol
  
Single Cell Lysis Approach
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) PacBio RS II
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0373408
Organism Name
Saccharothrix australiensis DSM 43800  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
ACTINOBACTERIA  
Genus
Saccharothrix  
Genus Synonyms
  
Species
Saccharothrix australiensis  
Subspecies
  
Species Synonyms
  
Strain
DSM 43800  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
DSM 43800  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.6798  
Exemplar Name
Saccharothrix australiensis  
Taxon DOI
10.1601/tx.6798  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 2072
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Actinobacteria  
NCBI Class
Actinomycetia  
NCBI Order
Pseudonocardiales  
NCBI Family
Pseudonocardiaceae  
NCBI Genus
Saccharothrix  
NCBI Species
Saccharothrix australiensis  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Soil  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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