PROJECT INFORMATION
GOLD Project ID
Gp0208383  
Project Name
Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MG  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MG
NCBI BioProject ID 539633
NCBI BioProject Accession PRJNA539633
NCBI Locus Tag
FCD52  
NCBI BioSample Accession SAMN11533417
PI Edward DeLong
Added By JGI automated process on 2017-03-10
Last Modified By JGI automated process on 2020-04-04
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Seawater microbial communities from the ocean water column in the North Pacific Ocean  
Is JGI Project
Yes  
Project Information Visibility Public
PROJECT TYPE
Specimen Biome
Nucleic Acid DNA
Sequencing Strategy
Metagenome  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX5781867  (Link to NCBI )
Experiment Title S1503-DNA-20-500_MG
Exp Library Strategy WGS
Library Source METAGENOMIC
Library Selection RANDOM
Library Name CYOGH
Library Layout PAIRED
PROJECT COMPOSITION
Study Comprehensive metagenome and single cell genome sequencing from the open ocean community of North Pacfic Subtropical Gyre, Station ALOHA
Biosample Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MG
Analysis Projects Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MG
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal Level 1: Standard Draft
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina NovaSeq
Illumina HiSeq 2500-1TB
PacBio Sequel
PacBio RS II
Library Method (MIGS-28)
Illumina Regular Fragment, 300bp, Tubes; PacBio >10kb w/ AMPure Bead Size Selection, Tubes  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MG
Other Names (alias, synonyms, short names)
  
Sample Description
Seawater microbial communities from the ocean water column in the North Pacific Ocean  
SAMPLE TAXONOMY
NCBI Taxonomy ID 1561972
GOLD CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Oceanic  
Specific Ecosystem
  

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  Changing the SP visibility will also change visibility on the following items:

 

Do you want to continue with this visibility change?

 

 

  Checking that this Sequencing Project can be made private:

 

Do you want to continue with this visibility change?

 

 

 

 

 

  Changing the SP Sequencing Strategy will also effect these items:

 

Do you want to continue with this Sequencing Strategy change?