PROJECT INFORMATION
GOLD Project ID
Gp0203371  
Project Name
Pelobacter sp. SFB93  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Pelobacter genome sequencing to understand the genetic mechanism of acetylene fermentation and metabolic diversity of the Pelobacter genus.
NCBI BioProject ID 319824
NCBI BioProject Accession PRJNA319824
NCBI Locus Tag
A7E78  
NCBI BioSample Accession SAMN04909703
PI
Added By JGI automated process on 2017-02-17
Last Modified By Hema Katta on 2018-05-26
Project Comments
  
Project Status
Complete and Published  
Project Relevance Environmental
Sequencing Center U.S. Geological Survey
Collaborating Institute
  
Funding Agency
  
Project Description
Pelobacter genome sequencing to understand the genetic mechanism of acetylene fermentation and metabolic diversity of the Pelobacter genus.  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Genome announcements Complete Genome Sequence of the Acetylene-Fermenting sp. Strain SFB93.

Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Pelobacter genome sequencing to understand the genetic mechanism of acetylene fermentation and metabolic diversity of the Pelobacter genus.
Organism Pelobacter sp. SFB93
Analysis Projects Pelobacter sp. SFB93
Number of Analysis Projects (AP)
1  
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) PacBio RS
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0364269
Organism Name
Pelobacter sp. SFB93  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-DELTA  
Genus
Pelobacter  
Genus Synonyms
  
Species
Pelobacter sp. SFB93  
Subspecies
  
Species Synonyms
  
Strain
SFB93  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1842532
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Deltaproteobacteria  
NCBI Order
Desulfuromonadales  
NCBI Family
Desulfuromonadaceae  
NCBI Genus
Pelobacter  
NCBI Species
Pelobacter sp. SFB93  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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