Studies
|
41,025 |
|
Biosamples
|
86,277 |
|
Sequencing Projects
|
322,382 |
|
Analysis Projects
|
267,823 |
| Organisms | 372,129 |
| PROJECT INFORMATION | |
|---|---|
|
GOLD Project ID
|
Gp0195587
|
|
Project Name
|
Phycisphaerae bacterium ST-NAGAB-D1
|
|
Other Names
|
unclassified Phycisphaerae ST-NAGAB-D1
|
|
Legacy GOLD ID
|
|
| NCBI BioProject Name |
|
|
NCBI BioProject ID
|
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|
NCBI BioProject Accession
|
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NCBI Locus Tag
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NCBI BioSample Accession
|
|
| PI | Stefan Spring |
| Added By |
Stefan Spring
on 2017-01-24 |
| Last Modified By |
Galina Ovchinnikova
on 2017-01-25 |
| Project Comments |
|
|
Project Status
|
Permanent Draft
|
|
Project Relevance
|
|
|
Sequencing Center
|
Leibniz Institute
(Germany)
|
|
Collaborating Institute
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Funding Agency
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Project Description
|
A novel lineage of the Phycisphaerae class from hypersaline sediments and mats
|
| Is JGI Project |
No
|
|
Project Information Visibility
|
Public |
| PROJECT TYPE | |
|
Specimen
|
Organism |
|
Nucleic Acid
|
DNA |
|
Sequencing Strategy
|
Whole Genome Sequencing
|
| EXTERNAL PROJECT LINKS | |
|
Project Information
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|
Database
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Genome Publications
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Other Publications
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| SRA Experiment |
|
| PROJECT COMPOSITION | |
| Study |
Diversity of culturable anaerobic prokaryotes in hypersaline microbial mats and sediments |
| Organism |
Phycisphaerae bacterium ST-NAGAB-D1 |
| Analysis Projects |
Phycisphaerae bacterium ST-NAGAB-D1 |
| Number of Analysis Projects |
1 |
| Number of DAPs |
0
|
| SEQUENCING INFORMATION | |
|---|---|
|
Sequencing Status
|
Complete |
| Sequencing Quality (MIGS-31) |
Level 6: Finished |
|
Finishing Goal
|
Level 6: Finished |
|
Sequencing Comments
|
|
|
Sequencing Technology
(MIGS-29)
|
PacBio RS |
|
Library Method
(MIGS-28)
|
|
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Number Of Reads
|
|
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Read Size
|
|
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Vector
|
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| GC Percent |
52
|
| Chromosome Count |
1
|
| Plasmid Count |
0
|
| ORGANISM NAME | |
|---|---|
| GOLD Organism ID |
Go0358204 |
| Organism Name |
Phycisphaerae bacterium ST-NAGAB-D1
|
| Other names (alias, synonyms, short names, common names) |
unclassified Phycisphaerae ST-NAGAB-D1
|
| Organism Domain |
BACTERIAL
|
| Phylogeny |
PLANCTOMYCETES
|
| Genus |
|
| Genus Synonyms |
|
| Species |
Phycisphaerae bacterium ST-NAGAB-D1
|
| Subspecies |
|
| Species Synonyms |
|
| Strain |
ST-NAGAB-D1
|
| Strain Synonyms |
|
| Serovar/Cultivar |
|
| Culture Collection ID |
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| Type Strain |
|
| Exemplar DOI |
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| Exemplar Name |
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| Taxon DOI |
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| Biosafety Level |
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| Organism Comments |
|
| Cultured |
Yes
|
| Culture Type |
Isolate
|
| Organism Type |
Natural
|
| Uncultured Type |
|
| Commercial Strain |
|
| Commercial Strain Comments |
|
|
ORGANISM TAXONOMY
|
|
| NCBI Taxonomy ID |
1936003 |
| NCBI Superkingdom |
Bacteria
|
| NCBI Kingdom |
|
| NCBI Phylum |
Planctomycetes
|
| NCBI Class |
Phycisphaerae
|
| NCBI Order |
|
| NCBI Family |
|
| NCBI Genus |
|
| NCBI Species |
Phycisphaerae bacterium ST-NAGAB-D1
|
| ISOLATION CLASSIFICATION | |
| Ecosystem |
Environmental
|
| Ecosystem Category |
Aquatic
|
| Ecosystem Type |
Sediment
|
| Ecosystem Subtype |
Unclassified
|
| Specific Ecosystem |
Unclassified
|
| ORGANISM EXTERNAL REFERENCES | |
| Strain Info ID |
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| Genbank 16S ID |
|
| GENERAL PROPERTIES | |
|---|---|
| Oxygen Requirement |
|
| Cell Shape |
Coccoid
|
| Motility |
|
| Sporulation |
|
| Temperature Range |
Mesophile
|
| Salinity |
25%
|
| pH |
6.8
|
| Cell Diameter |
|
| Cell Length |
|
| Color |
|
| Gram Staining |
|
| Biotic Relationships | Free living |
| Symbiotic Physical Interaction |
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| Symbiotic Relationship |
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| Symbiont Name |
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| Symbiont Taxon ID |
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| Cell Arrangements |
|
| Diseases |
|
| Known Habitats |
|
| Metabolisms |
Sugars fermentor |
| Phenotypes |
Fastidious |
| Energy Sources |
Chemoheterotroph |
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