JGI GOLD | Project

PROJECT INFORMATION
GOLD Project ID	Gp0195587
Project Name	Phycisphaerae bacterium ST-NAGAB-D1
Other Names	unclassified Phycisphaerae ST-NAGAB-D4
Legacy GOLD ID
NCBI BioProject Name	Genome sequencing and assembly of Anaerohalosphaera lusitana strain:ST-NAGAB-D1
NCBI BioProject ID	369385
NCBI BioProject Accession	PRJNA369385
NCBI Locus Tag
NCBI BioSample Accession	SAMN06284947
PI	Stefan Spring
Added By	Stefan Spring on 2017-01-24
Last Modified By	Mahathi Kandimalla on 2020-06-02
Project Comments
Project Status	Permanent Draft
Project Relevance
Sequencing Center	Leibniz Institute (Germany)
Collaborating Institute
Funding Agency
Project Description	A novel lineage of the Phycisphaerae class from hypersaline sediments and mats
Is JGI Project	No
Project Information Visibility	Public
PROJECT TYPE
Specimen	Organism
Nucleic Acid	DNA
Sequencing Strategy	Whole Genome Sequencing
EXTERNAL PROJECT LINKS
Project Information
Database
Genome Publications	International Journal of Systematic and Evolutionary Microbiology 70(2):1321-1330 .
Other Publications
SRA Experiment
PROJECT COMPOSITION
Study	Diversity of culturable anaerobic prokaryotes in hypersaline microbial mats and sediments
Organism	Phycisphaerae bacterium ST-NAGAB-D1
Analysis Projects	Phycisphaerae bacterium ST-NAGAB-D1
Number of Analysis Projects (AP)	1
Number of Derived Analyis Projects (DAP)	0

SEQUENCING INFORMATION
Sequencing Status	Complete
Sequencing Quality (MIGS-31)	Level 6: Finished
Finishing Goal	Level 6: Finished
Contamination Screening Input
DNA Amplification Method
Sequencing Comments
DNA Amplification Kit
Sequencing Technology (MIGS-29)	PacBio RS
Library Method (MIGS-28)
Library Layout
Library Screening Method
Number Of Reads
Read Size
Vector
GC Percent	52
Chromosome Count	1
Plasmid Count	0

ORGANISM NAME
GOLD Organism ID	Go0358204
Organism Name	Phycisphaerae bacterium ST-NAGAB-D1
Other names (alias, synonyms, short names, common names)	unclassified Phycisphaerae ST-NAGAB-D4
Organism Domain	BACTERIAL
Phylogeny	PLANCTOMYCETES
Genus
Genus Synonyms
Species	Phycisphaerae bacterium ST-NAGAB-D1
Subspecies
Species Synonyms
Strain	ST-NAGAB-D1
Strain Synonyms
Serovar/Cultivar
Culture Collection ID	DSM 103484
Type Strain	Yes
Exemplar DOI
Exemplar Name
Taxon DOI
Biosafety Level
Organism Comments
Cultured	Yes
Culture Type	Isolate
Organism Type	Natural
Uncultured Type
Commercial Strain
Commercial Strain Comments
ORGANISM TAXONOMY
NCBI Taxonomy ID	1936003
NCBI Superkingdom	Bacteria
NCBI Kingdom
NCBI Phylum	Planctomycetes
NCBI Class	Phycisphaerae
NCBI Order	Sedimentisphaerales
NCBI Family	Anaerohalosphaeraceae
NCBI Genus	Anaerohalosphaera
NCBI Species	Anaerohalosphaera lusitana
ISOLATION CLASSIFICATION
Ecosystem	Environmental
Ecosystem Category	Aquatic
Ecosystem Type	Sediment
Ecosystem Subtype	Unclassified
Specific Ecosystem	Unclassified
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID	KY471010

GENERAL PROPERTIES
Oxygen Requirement	Anaerobe
Cell Shape	Coccoid
Motility	Nonmotile
Sporulation	Nonsporulating
Temperature Range	Mesophile
Salinity	Halophile
pH	6.6
Cell Diameter	0.5 to 1.3 µm
Cell Length
Color
Gram Staining	Gram-
Biotic Relationships	Free living
Symbiotic Physical Interaction
Symbiotic Relationship
Symbiont Name
Symbiont Taxon ID
Cell Arrangements
Diseases
Known Habitats
Metabolisms	Sugars fermentor
Phenotypes	Fastidious
Energy Sources	Chemoheterotroph

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