PROJECT INFORMATION
GOLD Project ID
Gp0189600  
Project Name
Pauljensenia hongkongensis HKU8  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Pauljensenia hongkongensis HKU8 Genome sequencing
NCBI BioProject Accession PRJNA343394
NCBI Locus Tag
BH719  
NCBI BioSample Accession SAMN05786934
PI
Added By JGI automated process on 2016-12-10
Last Modified By Supratim Mukherjee on 2020-06-03
Project Comments
  
Project Status
Complete and Published  
Project Relevance
  
Sequencing Center Hebei Provincial Institute
Collaborating Institute
  
Funding Agency
  
Project Description
Actinomyces hongkongensis HKU8 genome sequencing  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
  
JGI Award DOI
Genome Publications Genome announcements Complete Genome Sequence of HKU8 Isolated from Human Blood.

Other Publications
  
Ignored Publications
  
Unassigned Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Pauljensenia hongkongensis HKU8 genome sequencing
Organism Pauljensenia hongkongensis HKU8
Analysis Projects Pauljensenia hongkongensis HKU8
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Single Cell Lysis Protocol
  
Single Cell Lysis Approach
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) Illumina
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0032720
Organism Name
Pauljensenia hongkongensis HKU8  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
ACTINOBACTERIA  
Genus
Pauljensenia  
Genus Synonyms
  
Species
Pauljensenia hongkongensis  
Subspecies
  
Species Synonyms
  
Strain
HKU8  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
DSM 15629  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.5785  
Exemplar Name
Pauljensenia hongkongensis  
Taxon DOI
10.1601/tx.32705  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 178339
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Actinobacteria  
NCBI Class
Actinomycetia  
NCBI Order
Actinomycetales  
NCBI Family
Actinomycetaceae  
NCBI Genus
Pauljensenia  
NCBI Species
Pauljensenia hongkongensis  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Mammals: Human  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Host
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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