PROJECT INFORMATION
GOLD Project ID
Gp0155379  
Project Name
Uncultured Surface Seawater Single Virus 41_D13  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name
  
NCBI BioProject Accession
NCBI Locus Tag
  
NCBI BioSample Accession
PI Manuel Martinez Garcia
Added By Manuel Martinez Garcia on 2016-09-05
Last Modified By Manuel Martinez Garcia on 2016-11-30
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center University of Alicante (Spain)
Collaborating Institute
  
Funding Agency
  
Project Description
Genomes of marine single viruses  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
  
JGI Award DOI
Genome Publications
  
Other Publications
  
Ignored Publications
  
Unassigned Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Single Virus Genomics
Organism Uncultured Surface Seawater Single Virus 41_D13
Analysis Projects Uncultured Surface Seawater Single Virus 41_D13
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Sorting Technology
  
Single Cell Lysis Protocol
  
Single Cell Lysis Approach
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) Illumina MiSeq
Library Method (MIGS-28)
Nextera XT DNA library  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
250  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0246425
Organism Name
Uncultured Surface Seawater Single Virus 41_D13  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
VIRUS  
Phylogeny
VIRUS  
Genus
  
Genus Synonyms
  
Species
Uncultured Surface Seawater Single Virus 41_D13  
Subspecies
  
Species Synonyms
  
Strain
41_D13  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
No  
Culture Type
  
Organism Type
Natural  
Uncultured Type
Single Cell  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 10239
NCBI Superkingdom
Viruses  
NCBI Kingdom
  
NCBI Phylum
  
NCBI Class
  
NCBI Order
  
NCBI Family
  
NCBI Genus
  
NCBI Species
  
Viral Group
  
Viral Subgroup
  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Coastal  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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