PROJECT INFORMATION
GOLD Project ID
Gp0154636  
Project Name
Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ859 (21.06)  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ859 (21.06)
NCBI BioProject ID 364682
NCBI BioProject Accession PRJNA364682
NCBI Locus Tag
BX988  
NCBI BioSample Accession SAMN06264331
PI Stephen Cary
Added By JGI automated process on 2016-08-24
Last Modified By JGI automated process on 2020-08-24
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Metagenome sequencing of the Antarctic desert landscape  
Is JGI Project
Yes  
Project Information Visibility Public
PROJECT TYPE
Specimen Biome
Nucleic Acid DNA
Sequencing Strategy
Metagenome  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX3008019  (Link to NCBI )
Experiment Title Antarctic Dry Valley metaG UQ859 (21.06)
Exp Library Strategy WGS
Library Source METAGENOMIC
Library Selection other
Library Name BNAWN
Library Layout PAIRED
Library Instrument ILLUMINA_HI_SEQ_2500
PROJECT COMPOSITION
Study Polar desert microbial communities from Antarctic Dry Valleys
Biosample Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ859 (21.06)
Analysis Projects Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ859 (21.06)
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal Level 1: Standard Draft
Contamination Screening Input
  
DNA Amplification Method
  
Sorting Technology
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) Illumina HiSeq 2500-1TB
Illumina HiSeq 2500
Library Method (MIGS-28)
Illumina Regular Fragment, 300bp, Tubes; Illumina Low Input Fragment, 300bp, Tubes  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ859 (21.06)
Other Names (alias, synonyms, short names)
  
Sample Description
  
SAMPLE TAXONOMY
NCBI Taxonomy ID 1348798
GOLD CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Freshwater  
Ecosystem Subtype
Ice  
Specific Ecosystem
  

 

 

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