PROJECT INFORMATION
GOLD Project ID
Gp0149978  
Project Name
Comamonas thiooxydans PHE2-6  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Comamonas thiooxydans PHE2-6 genome sequencing
NCBI BioProject ID 296943
NCBI BioProject Accession PRJNA296943
NCBI Locus Tag
ATN89  
NCBI BioSample Accession SAMN04112248
PI
Added By JGI automated process on 2016-06-28
Last Modified By Hema Katta on 2018-02-02
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Industrial
Sequencing Center Nagaoka University of Technology
Collaborating Institute
  
Funding Agency
  
Project Description
  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Genome announcements Draft Genome Sequence of Comamonas thiooxydans Strain PHE2-6 (NBRC 110656), a Chlorinated-Ethene-Degrading Bacterium.

Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Comamonas thiooxydans PHE2-6 genome sequencing
Organism Comamonas thiooxydans PHE2-6
Analysis Projects Comamonas thiooxydans PHE2-6
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina
454
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0144375
Organism Name
Comamonas thiooxydans PHE2-6  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-BETA  
Genus
Comamonas  
Genus Synonyms
  
Species
Comamonas thiooxydans  
Subspecies
  
Species Synonyms
  
Strain
PHE2-6  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
NBRC 110656  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 363952
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Betaproteobacteria  
NCBI Order
Burkholderiales  
NCBI Family
Comamonadaceae  
NCBI Genus
Comamonas  
NCBI Species
Comamonas thiooxydans  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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