Studies
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56,334 |
|
Biosamples
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196,920 |
|
Sequencing Projects
|
525,292 |
|
Analysis Projects
|
385,429 |
| Organisms | 484,221 |
| PROJECT INFORMATION | |
|---|---|
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GOLD Project ID
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Gp0144702
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Project Name
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Corynebacteriales bacterium X1698
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Other Names
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Legacy GOLD ID
|
|
| NCBI BioProject Name | Corynebacteriales bacterium |
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NCBI BioProject Accession
|
PRJNA256353 |
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NCBI Locus Tag
|
AL705
|
|
NCBI BioSample Accession
|
SAMN03943545 |
|
Source Sample ID
|
|
| PI | Unknown |
| Added By | JGI automated process on 2016-05-18 |
| Last Modified By | Supratim Mukherjee on 2016-05-18 |
| Project Comments |
|
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Project Status
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Complete and Published
|
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Project Relevance
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Medical |
|
Sequencing Center
|
Centers for Disease Control and Prevention (CDC), USA
(USA)
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Collaborating Institute
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Funding Agency
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Project Description
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CDC's Special Bacteriology Reference Laboratory (SBRL) has a vast collection of strains derived from human clinical specimens. These are their genomes.
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| Is JGI Project |
No
|
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Project Information Visibility
|
Public |
| PROJECT TYPE | |
|
Specimen
|
Organism |
|
Nucleic Acid
|
DNA |
|
Sequencing Strategy
|
Whole Genome Sequencing
|
| EXTERNAL PROJECT LINKS | |
|
JGI Data Utilization Status
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JGI Award DOI
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Genome Publications
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Genome announcements: Complete Genome Sequences for Two Strains of a Novel Fastidious, Partially Acid-Fast, Gram-Positive Corynebacterineae Bacterium, Derived from Human Clinical Samples. PubMed: 26659691 DOI: 10.1128/genomeA.01462-15 International Journal of Systematic and Evolutionary Microbiology: 66(8):2929-35 Lawsonella clevelandensis gen. nov., sp. nov., a new member of the suborder Corynebacterineae isolated from human abscesses. PubMed: 27130323 DOI: 10.1099/ijsem.0.001122 |
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Other Publications
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Ignored Publications
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Unassigned Publications
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| SRA Experiment |
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| PROJECT COMPOSITION | |
| Study |
novel fastidious, partially acid-fast, Gram-positive bacillus Genome sequencing |
| Organism |
Corynebacteriales bacterium X1698 |
| Analysis Projects |
Corynebacteriales bacterium X1698 |
| Number of Analysis Projects (AP) |
1 |
| Number of Derived Analyis Projects (DAP) |
0
|
| SEQUENCING INFORMATION | |
|---|---|
|
Sequencing Status
|
Complete |
| Sequencing Quality (MIGS-31) |
Level 6: Finished |
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Finishing Goal
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Contamination Screening Input
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DNA Amplification Method
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Single Cell Lysis Protocol
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Single Cell Lysis Approach
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Sequencing Comments
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DNA Amplification Kit
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Sequencing Technology
(MIGS-29)
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Illumina HiSeq |
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Library Method
(MIGS-28)
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Library Layout
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Library Screening Method
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Number Of Reads
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Read Size
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Vector
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| GC Percent |
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| Chromosome Count |
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| Plasmid Count |
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| ORGANISM NAME | |
|---|---|
| GOLD Organism ID |
Go0139620 |
| Organism Name |
Corynebacteriales bacterium X1698
|
| Other names (alias, synonyms, short names, common names) |
|
| Organism Domain |
BACTERIAL
|
| Phylogeny |
ACTINOMYCETOTA
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| Genus |
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| Genus Synonyms |
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| Species |
Corynebacteriales bacterium X1698
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| Subspecies |
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| Species Synonyms |
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| Strain |
X1698
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| Strain Synonyms |
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| Serovar/Cultivar |
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| Culture Collection ID |
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| Type Strain |
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| Exemplar DOI |
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| Exemplar Name |
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| Taxon DOI |
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| Biosafety Level |
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| Organism Comments |
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| Cultured |
Yes
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| Culture Type |
Isolate
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| Organism Type |
Natural
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| Uncultured Type |
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| Commercial Strain |
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| Commercial Strain Comments |
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ORGANISM TAXONOMY
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|
| NCBI Taxonomy ID |
1528099 |
| NCBI Superkingdom |
Bacteria
|
| NCBI Kingdom |
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| NCBI Phylum |
Actinomycetota
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| NCBI Class |
Actinomycetes
|
| NCBI Order |
Mycobacteriales
|
| NCBI Family |
Lawsonellaceae
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| NCBI Genus |
Lawsonella
|
| NCBI Species |
Lawsonella clevelandensis
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| ISOLATION CLASSIFICATION | |
| Ecosystem |
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| Ecosystem Category |
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| Ecosystem Type |
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| Ecosystem Subtype |
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| Specific Ecosystem |
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| ORGANISM EXTERNAL REFERENCES | |
| Strain Info ID |
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| Genbank 16S ID |
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| GENERAL PROPERTIES | |
|---|---|
| Oxygen Requirement |
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| Cell Shape |
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| Motility |
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| Sporulation |
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| Temperature Range |
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| Salinity |
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| pH |
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| Cell Diameter |
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| Cell Length |
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| Color |
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| Gram Staining |
Gram+
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| Biotic Relationships |
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| Symbiotic Physical Interaction |
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| Symbiotic Relationship |
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| Symbiont Name |
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| Symbiont Taxon ID |
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| Cell Arrangements |
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| Diseases |
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| Known Habitats |
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| Metabolisms |
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| Phenotypes |
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| Energy Sources |
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