PROJECT INFORMATION
GOLD Project ID
Gp0144578  
Project Name
Dechloromonas denitrificans ATCC BAA-841  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Dechloromonas denitrificans strain:ATCC BAA-841
NCBI BioProject ID 305142
NCBI BioProject Accession PRJNA305142
NCBI Locus Tag
AT959  
NCBI BioSample Accession SAMN04317214
PI
Added By JGI automated process on 2016-05-18
Last Modified By Supratim Mukherjee on 2017-03-29
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Environmental
Sequencing Center Korea Advanced Institute of Science and Technology
Collaborating Institute
  
Funding Agency
  
Project Description
This organism harbors a clade II nitrous oxide reductase, which is hypothesized to function as the nitrous oxide sink in the environment. Thus, this organism has great potential to be utilized in development of nitrous oxide removal technology. Nitrous oxide is a very potent greenhouse gas and an ozone depleting agent that can have serious consequences to the environment if released to the atmosphere in large quantity.  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Dechloromonas denitrificans strain:ATCC BAA-841 Genome sequencing
Organism Dechloromonas denitrificans ATCC BAA-841
Analysis Projects Dechloromonas denitrificans ATCC BAA-841
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina MiSeq
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0139502
Organism Name
Dechloromonas denitrificans ATCC BAA-841  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-BETA  
Genus
Dechloromonas  
Genus Synonyms
  
Species
Dechloromonas denitrificans  
Subspecies
  
Species Synonyms
  
Strain
ATCC BAA-841  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
ATCC BAA-841  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.9448  
Exemplar Name
Dechloromonas denitrificans  
Taxon DOI
10.1601/tx.9448  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 281362
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Betaproteobacteria  
NCBI Order
Rhodocyclales  
NCBI Family
Azonexaceae  
NCBI Genus
Dechloromonas  
NCBI Species
Dechloromonas denitrificans  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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