PROJECT INFORMATION
GOLD Project ID
Gp0131294  
Project Name
Furfurilactobacillus rossiae DSM 15814  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Genomic characterization of the genus Furfurilactobacillus
NCBI BioProject Accession PRJNA222257
NCBI Locus Tag
  
NCBI BioSample Accession SAMN02369495
Source Sample ID
PI Unknown
Added By JGI automated process on 2016-02-03
Last Modified By Supratim Mukherjee on 2021-03-25
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Agricultural
Sequencing Center Shanghai Majorbio Bio-pharm Technology Co.
Collaborating Institute
  
Funding Agency
  
Project Description
Genomic characterization of the genus Furfurilactobacillus  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
  
JGI Award DOI
Genome Publications Nature communications: Expanding the biotechnology potential of lactobacilli through comparative genomics of 213 strains and associated genera.
PubMed: 26415554 DOI: 10.1038/ncomms9322
Other Publications Journal of bacteriology: 194(19):5460-1 Draft genome sequence of Lactobacillus rossiae DSM 15814(T).
PubMed: 22965087 DOI: 10.1128/JB.01248-12
Ignored Publications
  
Unassigned Publications
  
SRA Experiment
 
SRA Experiment Id SRX456353  (Link to NCBI )
Experiment Title Whole Genome Sequencing of Lactobacillus rossiae DSM 15814
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name DSM_15814
Library Layout PAIRED
Library Instrument ILLUMINA_HI_SEQ_2000
Spot Length 202
PROJECT COMPOSITION
Study Expanding the biotechnology potential of lactobacilli through comparative genomics - Inner Mongolia Agricultural University
Organism Furfurilactobacillus rossiae DSM 15814
Analysis Projects Furfurilactobacillus rossiae DSM 15814
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Single Cell Lysis Protocol
  
Single Cell Lysis Approach
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) Illumina MiSeq
Illumina HiSeq
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0016873
Organism Name
Furfurilactobacillus rossiae DSM 15814  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Furfurilactobacillus  
Genus Synonyms
  
Species
Furfurilactobacillus rossiae  
Subspecies
  
Species Synonyms
  
Strain
DSM 15814  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
DSM 15814  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.8660  
Exemplar Name
Lactobacillus rossiae  
Taxon DOI
10.1601/tx.8660  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1114972
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Bacillota  
NCBI Class
Bacilli  
NCBI Order
Lactobacillales  
NCBI Family
Lactobacillaceae  
NCBI Genus
Furfurilactobacillus  
NCBI Species
Furfurilactobacillus rossiae  
ISOLATION CLASSIFICATION
Ecosystem
Engineered  
Ecosystem Category
Food production  
Ecosystem Type
Bread production  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 382710
Genbank 16S ID AJ564009
GENERAL PROPERTIES
Oxygen Requirement
Microaerophilic  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Salinity
  
pH
  
Cell Diameter
0.5 um  
Cell Length
1.0-1.5 um  
Color
White  
Gram Staining
Gram+  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Pairs
Chains
Diseases
  
Known Habitats Wheat
Fermented food product
Sourdough
Metabolisms
  
Phenotypes Catalase negative
Energy Sources
  

 

 

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