PROJECT INFORMATION
GOLD Project ID
Gp0128396  
Project Name
Silvanigrella aquatica MWH-Nonnen-W8red  
Other Names
Silvanigrella aquatica MWH-Nonnen-W8red  
Legacy GOLD ID
  
NCBI BioProject Name Proteobacterium sp. Nonnen-W8red genome sequencing and assembly
NCBI BioProject ID 310399
NCBI BioProject Accession PRJNA310399
NCBI Locus Tag
  
NCBI BioSample Accession SAMN04451922
PI Martin Hahn
Added By Martin Hahn on 2016-02-02
Last Modified By Martin Hahn on 2017-09-06
Project Comments
  
Project Status
Complete and Published  
Project Relevance
  
Sequencing Center University of Innsbruck (Austria)
Collaborating Institute
  
Funding Agency Austrian Science Fund (FWF) (Austria)
Project Description
FWF I482-B09  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications International Journal of Systematic and Evolutionary Microbiology 67(8):2555-2568 Silvanigrella aquatica gen. nov., sp. nov., isolated from a freshwater lake, description of Silvanigrellaceae fam. nov. and Silvanigrellales ord. nov., reclassification of the order Bdellovibrionales in the class Oligoflexia, reclassification of the families Bacteriovoracaceae and Halobacteriovoraceae in the new order Bacteriovoracales ord. nov., and reclassification of the family Pseudobacteriovoracaceae in the order Oligoflexales.

Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Silvanigrella aquatica MWH-Nonnen-W8red
Organism Silvanigrella aquatica MWH-Nonnen-W8red
Analysis Projects Silvanigrella aquatica MWH-Nonnen-W8red
Number of Analysis Projects (AP)
1  
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 1: Standard Draft
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina MiSeq
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0120501
Organism Name
Silvanigrella aquatica MWH-Nonnen-W8red  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA  
Genus
  
Genus Synonyms
  
Species
Silvanigrella aquatica  
Subspecies
  
Species Synonyms
  
Strain
MWH-Nonnen-W8red  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
10.1601/ex.30508  
Exemplar Name
Silvanigrella aquatica  
Taxon DOI
10.1601/tx.30508  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1915309
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Oligoflexia  
NCBI Order
Silvanigrellales  
NCBI Family
Silvanigrellaceae  
NCBI Genus
Silvanigrella  
NCBI Species
Silvanigrella aquatica  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Freshwater  
Ecosystem Subtype
Lake  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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