PROJECT INFORMATION
GOLD Project ID
Gp0123455  
Project Name
Ignavibacteriales bacterium JGI CrystG Aug3-1-B21  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Ignavibacteriales bacterium JGI CrystG Aug3-1-B21
NCBI BioProject ID 403048
NCBI BioProject Accession PRJNA403048
NCBI Locus Tag
CLY29  
NCBI BioSample Accession SAMN07838523
PI Jill Banfield
Added By JGI automated process on 2015-10-16
Last Modified By JGI automated process on 2019-09-29
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Development of a pipeline for high-throughput recovery of near-complete and complete microbial genomes from complex metagenomic datasets  
Is JGI Project
Yes  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX3538822  (Link to NCBI )
Experiment Title Ignavibacteriales bacterium JGI CrystG Aug3-1-B21
Exp Library Strategy WGA
Library Source GENOMIC
Library Selection other
Library Name AYZPO
Library Layout PAIRED
Library Instrument NEXT_SEQ_500
PROJECT COMPOSITION
Study Development of a pipeline for high-throughput recovery of near-complete and complete microbial genomes from complex metagenomic datasets
Organism Ignavibacteriales bacterium JGI CrystG Aug3-1-B21
Analysis Projects Ignavibacteriales bacterium JGI CrystG Aug3-1-B21 (unscreened)
Ignavibacteriales bacterium JGI CrystG Aug3-1-B21 (contamination screened)
Number of Analysis Projects 2
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal Level 1: Standard Draft
Sequencing Comments
02-.CrystG.CGAUG3.SYBR.01.B21.S17_B01_013  
Sequencing Technology (MIGS-29) Illumina HiSeq 2500-1TB
Illumina NextSeq-MO
Illumina NextSeq-HO
Library Method (MIGS-28)
Production RnD, Plates  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0118339
Organism Name
Ignavibacteriales bacterium JGI CrystG Aug3-1-B21  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
IGNAVIBACTERIAE (ZB1)  
Genus
  
Genus Synonyms
  
Species
Ignavibacteriales bacterium JGI CrystG Aug3-1-B21  
Subspecies
  
Species Synonyms
  
Strain
JGI CrystG Aug3-1-B21  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
No  
Culture Type
  
Organism Type
Natural  
Uncultured Type
Single Cell  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 2049428
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Ignavibacteriae  
NCBI Class
Ignavibacteria  
NCBI Order
Ignavibacteriales  
NCBI Family
  
NCBI Genus
  
NCBI Species
Ignavibacteriales bacterium  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Freshwater  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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