PROJECT INFORMATION
GOLD Project ID
Gp0121681  
Project Name
Hapalosiphon sp. MRB220 - Xanthomonadaceae spp. co-culture  
Other Names
Hapalosiphon sp. MRB220 - Xanthomonadaceae spp. co-culture  
Legacy GOLD ID
  
NCBI BioProject Name
  
NCBI BioProject ID
NCBI BioProject Accession PRJNA293405
NCBI Locus Tag
  
NCBI BioSample Accession SAMN04002543
PI BOONFEI TAN
Added By BOONFEI TAN on 2015-10-05
Last Modified By Hema Katta on 2019-01-04
Project Comments
  
Project Status
Complete and Published  
Project Relevance
  
Sequencing Center Singapore Centre on Environmental Life Sciences Engineering (SCELSE) (Singapore)
Collaborating Institute
  
Funding Agency
  
Project Description
genomes of cyanobacteria isolated from freshwater reservoirs  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Standards in genomic sciences 11(1):58 Insights from the draft genome of the subsection V (Stigonematales) cyanobacterium Hapalosiphon sp. Strain MRB220 associated with 2-MIB production.

Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Hapalosiphon sp. MRB220
Organism Hapalosiphon sp. MRB220
Analysis Projects Hapalosiphon sp. MRB220 - Xanthomonadaceae spp. co-culture
Number of Analysis Projects (AP)
1  
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 1: Standard Draft
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina HiSeq 2000
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0116850
Organism Name
Hapalosiphon sp. MRB220  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
CYANOBACTERIA  
Genus
Hapalosiphon  
Genus Synonyms
  
Species
Hapalosiphon sp. MRB220  
Subspecies
  
Species Synonyms
  
Strain
MRB220  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Co-Culture  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1704290
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Cyanobacteria  
NCBI Class
  
NCBI Order
Nostocales  
NCBI Family
Hapalosiphonaceae  
NCBI Genus
Hapalosiphon  
NCBI Species
Hapalosiphon sp. MRB220  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Freshwater  
Ecosystem Subtype
Lake  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  Changing the SP visibility will also change visibility on the following items:

 

Do you want to continue with this visibility change?

 

 

  Checking that this Sequencing Project can be made private:

 

Do you want to continue with this visibility change?

 

 

 

 

 

  Changing the SP Sequencing Strategy will also effect these items:

 

Do you want to continue with this Sequencing Strategy change?