PROJECT INFORMATION
GOLD Project ID
Gp0119854  
Project Name
Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series 2014_10_20  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series 2014_10_20
NCBI BioProject Accession PRJNA375202
NCBI Locus Tag
B1V14  
NCBI BioSample Accession SAMN06343770
Source Sample ID
PI Kelly Wrighton
Added By JGI automated process on 2015-08-15
Last Modified By JGI automated process on 2022-10-11
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Microbial controls on biogeochemical cycling in deep subsurface shale carbon reservoirs  
Is JGI Project
Yes  
Project Information Visibility Public
PROJECT TYPE
Specimen Biome
Nucleic Acid DNA
Sequencing Strategy
Metagenome  
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
Unrestricted  
JGI Award DOI 10.46936/jejc.proj.2014.48483/60005501
JGI Portal Download Raw Sequence Data
Genome Publications Nat Microbiol: 4(2):352-361 Viruses control dominant bacteria colonizing the terrestrial deep biosphere after hydraulic fracturing.
PubMed: 30510171 DOI: 10.1038/s41564-018-0312-6
Other Publications
  
Ignored Publications
  
Unassigned Publications
  
SRA Experiment
 
SRA Experiment Id SRX2924399  (Link to NCBI )
Experiment Title Wagner 4 Time Series 2014_10_20
Exp Library Strategy WGS
Library Source METAGENOMIC
Library Selection other
Library Name ASGYA
Library Layout PAIRED
Library Instrument ILLUMINA_HI_SEQ_2500
PROJECT COMPOSITION
Study Deep subsurface shale carbon reservoir microbial communities from Ohio and West Virginia, USA
Biosample Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series 2014_10_20
Analysis Projects Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series 2014_10_20
Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series 2014_10_20 (SPAdes)
Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series 2014_10_20 NMDC pilot
Number of Analysis Projects (AP) 3
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal Level 1: Standard Draft
Contamination Screening Input
  
DNA Amplification Method
  
Sorting Technology
  
Single Cell Lysis Protocol
  
Single Cell Lysis Approach
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) Illumina HiSeq 2500-1TB
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series 2014_10_20
Other Names (alias, synonyms, short names)
  
Sample Description
time series sample of the fluid post-fracking  
SAMPLE TAXONOMY
NCBI Taxonomy ID 1564682
GOLD CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Deep subsurface  
Ecosystem Subtype
Shale gas reservoir  
Specific Ecosystem
Produced water/Flow back  

 

 

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