PROJECT INFORMATION
GOLD Project ID
Gp0118200  
Project Name
Pseudothermotoga hypogea DSM 11164 = NBRC 106472  
Other Names
Pseudothermotoga hypogea DSM 11164 = NBRC 106472  
Legacy GOLD ID
  
NCBI BioProject Name Pseudothermotoga hypogea DSM 11164 = NBRC 106472
NCBI BioProject Accession PRJNA234771
NCBI Locus Tag
AJ81  
NCBI BioSample Accession
Source Sample ID
PI Unknown
Added By JGI automated process on 2015-07-02
Last Modified By Supratim Mukherjee on 2017-03-08
Project Comments
  
Project Status
incomplete  
Project Relevance Industrial
Sequencing Center University of Waterloo (Canada)
Collaborating Institute
  
Funding Agency
  
Project Description
Thermotoga hypogea genome sequence  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
  
JGI Award DOI
Genome Publications
  
Other Publications
  
Ignored Publications
  
Unassigned Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Pseudothermotoga hypogea DSM 11164 = NBRC 106472 Genome sequencing
Organism Pseudothermotoga hypogea DSM 11164
Analysis Projects
  
Number of Analysis Projects (AP) 0
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status
Sequencing Quality (MIGS-31)
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Single Cell Lysis Protocol
  
Single Cell Lysis Approach
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0014139
Organism Name
Pseudothermotoga hypogea DSM 11164  
Other names (alias, synonyms, short names, common names)
Thermotoga hypogea DSM 11164  
Organism Domain
BACTERIAL  
Phylogeny
THERMOTOGAE  
Genus
Pseudothermotoga  
Genus Synonyms
Thermotoga  
Species
Pseudothermotoga hypogea  
Subspecies
  
Species Synonyms
  
Strain
DSM 11164  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
DSM 11164  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.462  
Exemplar Name
Pseudothermotoga hypogea  
Taxon DOI
10.1601/tx.25054  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1123384
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Thermotogae  
NCBI Class
Thermotogae  
NCBI Order
Thermotogales  
NCBI Family
Thermotogaceae  
NCBI Genus
Pseudothermotoga  
NCBI Species
Pseudothermotoga hypogea  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Oil reservoir  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID U89768
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Thermophile  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Oil fields
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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