PROJECT INFORMATION
GOLD Project ID
Gp0118036  
Project Name
Muricauda lutaonensis CC-HSB-11  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Muricauda lutaonensis
NCBI BioProject ID 276921
NCBI BioProject Accession PRJNA276921
NCBI Locus Tag
VC82  
NCBI BioSample Accession SAMN03382536
PI
Added By JGI automated process on 2015-07-02
Last Modified By Supratim Mukherjee on 2018-02-07
Project Comments
  
Project Status
Complete and Published  
Project Relevance Environmental
Sequencing Center Korea Research Institute of Bioscience and Biotechnology (South Korea)
Collaborating Institute
  
Funding Agency
  
Project Description
Muricauda lutaonensis CC-HSB-11T is a yellow-pigmented, moderately thermophilic, Gram-negative, rod-shaped bacterium that was isolated from a coastal hot spring of a volcanic island (Lutao) in the Pacific Ocean, off the eastern coast of Taiwan. We represent the complete genome of M. lutaonensis strain CC-HSB-11, which is the type strain of the species.  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX894219  (Link to NCBI )
Experiment Title Complete genome of Muricauda lutaonensis CC-HSB-11
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name PacBio RS II P5/C3 chemistry
Library Layout SINGLE
Library Instrument PAC_BIO_RS
Spot Length 0
PROJECT COMPOSITION
Study Muricauda lutaonensis strain:CC-HSB-11 Genome sequencing
Organism Muricauda lutaonensis CC-HSB-11
Analysis Projects Muricauda lutaonensis CC-HSB-11
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Sequencing Comments
PacBio Sequencing with P5-C3 chemistry  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) PacBio RS II
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0114279
Organism Name
Muricauda lutaonensis CC-HSB-11  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
BACTEROIDETES  
Genus
Muricauda  
Genus Synonyms
  
Species
Muricauda lutaonensis  
Subspecies
  
Species Synonyms
  
Strain
CC-HSB-11  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.14859  
Exemplar Name
Muricauda lutaonensis  
Taxon DOI
10.1601/tx.14859  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 516051
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Bacteroidetes  
NCBI Class
Flavobacteriia  
NCBI Order
Flavobacteriales  
NCBI Family
Flavobacteriaceae  
NCBI Genus
Muricauda  
NCBI Species
Muricauda lutaonensis  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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