PROJECT INFORMATION
GOLD Project ID
Gp0117315  
Project Name
Acidiplasma aeolicum V  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Acidiplasma aeolicum
NCBI BioProject ID 271547
NCBI BioProject Accession PRJNA271547
NCBI Locus Tag
SE19  
NCBI BioSample Accession SAMN03274863
PI
Added By JGI automated process on 2015-07-02
Last Modified By Supratim Mukherjee on 2017-03-29
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Evolution
Sequencing Center California Institute of Technology (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
The genome of the Acidiplasma aeolicum DSM 18409 was sequenced to investigate the diversity and evolution of iron oxidation in Archaea.  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Acidiplasma aeolicum strain:V Genome sequencing
Organism Acidiplasma aeolicum V
Analysis Projects Acidiplasma aeolicum V
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) Illumina MiSeq
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0031018
Organism Name
Acidiplasma aeolicum V  
Other names (alias, synonyms, short names, common names)
Acidiplasma aeolicum V  
Organism Domain
ARCHAEAL  
Phylogeny
EURYARCHAEOTA-THERMOPLASMATA  
Genus
Acidiplasma  
Genus Synonyms
  
Species
Acidiplasma aeolicum  
Subspecies
  
Species Synonyms
  
Strain
V  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
DSM 18409  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.14804  
Exemplar Name
Acidiplasma aeolicum  
Taxon DOI
10.1601/tx.14804  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 507754
NCBI Superkingdom
Archaea  
NCBI Kingdom
  
NCBI Phylum
Candidatus Thermoplasmatota  
NCBI Class
Thermoplasmata  
NCBI Order
Thermoplasmatales  
NCBI Family
Ferroplasmaceae  
NCBI Genus
Acidiplasma  
NCBI Species
Acidiplasma aeolicum  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Thermal springs  
Ecosystem Subtype
Tepid (25-34C)  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID AM943980
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Hot spring
Sand
Aquatic
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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