PROJECT INFORMATION
GOLD Project ID
Gp0116526  
Project Name
Formosa sp. Hel1_31_208  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Formosa sp. Hel1_31_208
NCBI BioProject ID 311478
NCBI BioProject Accession PRJNA311478
NCBI Locus Tag
AX011  
NCBI BioSample Accession SAMN04515667
PI Hanno Teeling
Added By JGI automated process on 2015-06-23
Last Modified By JGI automated process on 2019-09-29
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
COGITO (Coastal Microbe Genomic & Taxonomic Observatory)  
Is JGI Project
Yes  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX2143433
Experiment Title Formosa sp. Hel1_31_208
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name ANZZC
Library Layout SINGLE
Library Instrument PAC_BIO_RS
 
SRA Experiment Id SRX2143434
Experiment Title Formosa sp. Hel1_31_208
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name ANZZC
Library Layout SINGLE
Library Instrument PAC_BIO_RS
PROJECT COMPOSITION
Study A large-scale integrated study on North Sea by COGITO (Coastal Microbe Genomic & Taxonomic Observatory)
Organism Formosa sp. Hel1_31_208
Analysis Projects Formosa sp. Hel1_31_208
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 3: Improved-High-Quality Draft
Finishing Goal Level 3: Improved-High-Quality Draft
Sequencing Comments
  
Sequencing Technology (MIGS-29) PacBio RS
PacBio RS II
Library Method (MIGS-28)
PacBio >10kb w/ AMPure Bead Size Selection, Tubes  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0113157
Organism Name
Formosa sp. Hel1_31_208  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
BACTEROIDETES  
Genus
Formosa  
Genus Synonyms
  
Species
Formosa sp. Hel1_31_208  
Subspecies
  
Species Synonyms
  
Strain
Hel1_31_208  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1798225
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Bacteroidetes  
NCBI Class
Flavobacteriia  
NCBI Order
Flavobacteriales  
NCBI Family
Flavobacteriaceae  
NCBI Genus
Formosa  
NCBI Species
Formosa sp. Hel1_31_208  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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