PROJECT INFORMATION
GOLD Project ID
Gp0112362  
Project Name
Methylophilaceae bacterium SCGC AD-274-C02  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Methylophilaceae bacterium SCGC AD-274-C02
NCBI BioProject ID 586486
NCBI BioProject Accession PRJNA586486
NCBI Locus Tag
GG474  
NCBI BioSample Accession SAMN13169883
PI Ramunas Stepanauskas
Added By JGI automated process on 2015-04-01
Last Modified By JGI automated process on 2019-11-04
Project Comments
  
Project Status
incomplete  
Project Relevance
  
Sequencing Center Bigelow Laboratory Single Cell Genomics Center (SCGC) (USA)
DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Enigmatic life underneath us: genomic analysis of deep subsurface microorganisms  
Is JGI Project
Yes  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Enigmatic life underneath us: genomic analysis of deep subsurface microorganisms
Organism Methylophilaceae bacterium SCGC AD-274-C02
Analysis Projects
  
Number of Analysis Projects 0
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal Level 1: Standard Draft
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina HiSeq 2500
Illumina NextSeq-HO
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0110892
Organism Name
Methylophilaceae bacterium SCGC AD-274-C02  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-BETA  
Genus
  
Genus Synonyms
  
Species
Methylophilaceae bacterium SCGC AD-274-C02  
Subspecies
  
Species Synonyms
  
Strain
SCGC AD-274-C02  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
No  
Culture Type
  
Organism Type
Natural  
Uncultured Type
Single Cell  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 2030816
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Betaproteobacteria  
NCBI Order
Nitrosomonadales  
NCBI Family
Methylophilaceae  
NCBI Genus
  
NCBI Species
Methylophilaceae bacterium  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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