PROJECT INFORMATION
GOLD Project ID
Gp0108200  
Project Name
Aspergillus transmontanensis CBS 130015 Transcriptome  
Other Names
  
Legacy ER Project ID
79619  
Legacy GOLD ID
  
NCBI BioProject Name Aspergillus transmontanensis CBS 130015 Transcriptome
NCBI BioProject ID 459654
NCBI BioProject Accession PRJNA459654
NCBI Locus Tag
  
NCBI BioSample Accession SAMN09074102
PI Scott E. Baker
Added By JGI automated process on 2014-10-27
Last Modified By JGI automated process on 2018-10-10
Project Comments
  
Project Status
incomplete  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Aspergillus whole-genus sequencing  
Is JGI Project
Yes  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid RNA
Sequencing Strategy
Transcriptome  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX5208239
Experiment Title Aspergillus transmontanensis CBS 130015 Transcriptome
Exp Library Strategy RNA_SEQ
Library Source TRANSCRIPTOMIC
Library Selection RT-PCR
Library Name BAXYB
Library Layout PAIRED
Library Instrument ILLUMINA_HI_SEQ_2500
 
SRA Experiment Id SRX5208240
Experiment Title Aspergillus transmontanensis CBS 130015 Transcriptome
Exp Library Strategy RNA_SEQ
Library Source TRANSCRIPTOMIC
Library Selection RT-PCR
Library Name AYXAH
Library Layout PAIRED
Library Instrument ILLUMINA_HI_SEQ_2500
PROJECT COMPOSITION
Study Genome and Transcriptome sequencing of members of the genus Aspergillus
Organism Aspergillus transmontanensis CBS 130015
Analysis Projects
  
Number of Analysis Projects 0
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina NovaSeq
Illumina HiSeq 2500-1TB
Library Method (MIGS-28)
Illumina RNASeq w/PolyA Selection, Plates  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0108199
Organism Name
Aspergillus transmontanensis CBS 130015  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
EUKARYAL  
Phylogeny
FUNGI-ASCOMYCOTA  
Genus
Aspergillus  
Genus Synonyms
  
Species
Aspergillus transmontanensis  
Subspecies
  
Species Synonyms
  
Strain
CBS 130015  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
CBS 130015  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1034304
NCBI Superkingdom
Eukaryota  
NCBI Kingdom
Fungi  
NCBI Phylum
Ascomycota  
NCBI Class
Eurotiomycetes  
NCBI Order
Eurotiales  
NCBI Family
Aspergillaceae  
NCBI Genus
Aspergillus  
NCBI Species
Aspergillus transmontanensis  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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